pyridoxine 5'-phosphate

Three steps

• N-carbamoyl-L-aspartateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. oxaloacetate + L-alanine = L-aspartate + pyruvate
  3. carbamoyl phosphate + L-aspartate = N-carbamoyl-L-aspartate + phosphate + H(+)

  Catalysed by SCLY, AGXT2, CADcytosol

• 3-oxopropanoateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. (R)-3-Amino-2-methylpropanoate:pyruvate aminotransferase
  3. 3-oxopropanoate + L-alanine = beta-alanine + pyruvate

  Catalysed by SCLY, AGXT2cytosol, mitochondrial matrixOne of 2 routes

• 4-methylthio-2-oxobutanoic acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. transport of alanine and methionine (cytosol to extracellular)
  3. L-Methionine:oxygen oxidoreductase (deaminating)

  Catalysed by SCLY, SLC7A5, IL4I1cytosol, extracellular space

• di-mu-sulfido-diiron(2+)Reach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. transport of alanine and cysteine (cytosol to extracellular)
  3. De novo synthesis of 2Fe2S

  Catalysed by SCLY, SLC7A5, NDUFAB1, FDXR and 5 morecytosol, extracellular space, mitochondrial matrix

• (S)-3-methyl-2-oxopentanoateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. transport of alanine and isoleucine (cytosol to extracellular)
  3. L-isoleucine + 2-oxoglutarate = (S)-3-methyl-2-oxopentanoate + L-glutamate

  Catalysed by SCLY, SLC7A5, BCAT2, BCAT1cytosol, extracellular space

• 5-aminolevulinateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. succinyl-CoA + glycine + H(+) = 5-aminolevulinate + CO2 + CoA

  Catalysed by SCLY, AGXT, AGXT2, ALAS1 and 1 morecytosol, mitochondrial matrix

• 3-methyl-2-oxovaleric acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. transport of alanine and isoleucine (cytosol to extracellular)
  3. L-Leucine:2-oxoglutarate aminotransferase

  Catalysed by SCLY, SLC7A5, BCAT1cytosol, extracellular spaceOne of 2 routes

• 3-(4-hydroxyphenyl)pyruvateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. transport of alanine and tyrosine (cytosol to extracellular)
  3. L-tyrosine:2-oxoglutarate aminotransferase

  Catalysed by SCLY, SLC7A5, GOT2, GOT1 and 1 morecytosol, extracellular spaceOne of 3 routes

• glycochenodeoxycholateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. chenodeoxycholoyl-CoA + glycine = glycochenodeoxycholate + CoA + H(+)

  Catalysed by SCLY, AGXT, AGXT2, BAATcytosol, mitochondrial matrix

• glycochenodeoxycholic acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. bile acid-CoA: amino acid N-acyltransferase

  Catalysed by SCLY, AGXT, AGXT2, BAATcytosol, mitochondrial matrix, peroxisomeOne of 3 routes

• 3-hydroxyanthranilateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. 3-hydroxy-L-kynurenine + H2O = 3-hydroxyanthranilate + L-alanine + H(+)
  3. 3-hydroxy-L-kynurenine + H2O = 3-hydroxyanthranilate + L-alanine + H(+)

  Catalysed by SCLY, KYNUcytosol

• glyoxylateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. glycine + 2-oxoglutarate = glyoxylate + L-glutamate

  Catalysed by SCLY, AGXT, AGXT2, AADATcytosol, mitochondrial matrixOne of 11 routes

• glycolithocholic acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. bile acid-CoA:amino acid N-acyltransferase (glycine)

  Catalysed by SCLY, AGXT, AGXT2, BAATcytosol, mitochondrial matrixOne of 2 routes

• L-2-amino-3-oxobutanoic acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. Acetyl-CoA:glycine C-acetyltransferase

  Catalysed by SCLY, AGXT, AGXT2, GCATcytosol, mitochondrial matrix

• (R)-lactic acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. (R)-3-Amino-2-methylpropanoate:pyruvate aminotransferase
  3. (R)-Lactate:NAD+ oxidoreductase

  Catalysed by SCLY, AGXT2, LDHDcytosol, mitochondrial matrix

• (S)-lactic acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. (R)-3-Amino-2-methylpropanoate:pyruvate aminotransferase
  3. (S)-Lactate:NAD+ oxidoreductase

  Catalysed by SCLY, AGXT2, LDHB, LDHAL6Bcytosol, mitochondrial matrixOne of 5 routes

• 25-hydroxycholesterolReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. Mo-molybdopterin + L-cysteine + AH2 = thio-Mo-molybdopterin + L-alanine + A + H2O
  3. cholesterol + AH2 + O2 = 25-hydroxycholesterol + A + H2O

  Catalysed by SCLY, MOCOS, CH25Hcytosol

• 2-iminopropanoateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. (R)-3-Amino-2-methylpropanoate:pyruvate aminotransferase
  3. 2-iminopropanoate + H2O = pyruvate + NH4(+)

  Catalysed by SCLY, AGXT2, RIDAcytosol, mitochondrial matrix

• phosphoenolpyruvic acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. (R)-3-Amino-2-methylpropanoate:pyruvate aminotransferase
  3. pyruvate kinase (dTDP)

  Catalysed by SCLY, AGXT2, PKM, PKLRcytosol, mitochondrial matrix

• N-acetyl-beta-neuraminic acidReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. (R)-3-Amino-2-methylpropanoate:pyruvate aminotransferase
  3. N-Acetylneuraminate pyruvate-lyase (N-acetyl-D-mannosamine-forming)

  Catalysed by SCLY, AGXT2, NPLcytosol, mitochondrial matrix

• S(8)-aminomethyldihydrolipoamideReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. dihydrolipoyl dehydrogenase ([protein]-N6-(lipoyl)lysine)

  Catalysed by SCLY, AGXT, AGXT2, GLDC and 1 morecytosol, mitochondrial matrix

• taurineReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. bile acid-CoA:amino acid N-acyltransferase (taurodeoxycholate)

  Catalysed by SCLY, BAATcytosol, mitochondrial matrixOne of 4 routes

• all-trans-13,14-dihydroretinolReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. Mo-molybdopterin + L-cysteine + AH2 = thio-Mo-molybdopterin + L-alanine + A + H2O
  3. all-trans-13,14-dihydroretinol + A = all-trans-retinol + AH2

  Catalysed by SCLY, MOCOS, RETSATcytosol

• 3,3',5-triiodo-L-thyronineReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. Mo-molybdopterin + L-cysteine + AH2 = thio-Mo-molybdopterin + L-alanine + A + H2O
  3. 3,3',5-triiodo-L-thyronine + iodide + A + H(+) = L-thyroxine + AH2

  Catalysed by SCLY, MOCOS, DIO1, DIO2cytosol

• 3,3',5'-triiodo-L-thyronineReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. Mo-molybdopterin + L-cysteine + AH2 = thio-Mo-molybdopterin + L-alanine + A + H2O
  3. 3,3',5'-triiodo-L-thyronine + iodide + A + H(+) = L-thyroxine + AH2

  Catalysed by SCLY, MOCOS, DIO1, DIO3cytosol

• a 3-acylpyruvateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. (R)-3-Amino-2-methylpropanoate:pyruvate aminotransferase
  3. a 3-acylpyruvate + H2O = a carboxylate + pyruvate + H(+)

  Catalysed by SCLY, AGXT2, FAHD1cytosol, mitochondrial matrix

• (R)-methylmalonyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. aldehyde dehydrogenase (2-methyl-3-oxopropanoate)

  Catalysed by SCLY, ALDH6A1cytosol, mitochondrial matrixOne of 2 routes

• (S)-methylmalonyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. (S)-methylmalonyl-CoA hydrolase

  Catalysed by SCLYcytosol, mitochondrial matrix

• 3'-dephospho-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. acid phosphatase 2, lysosomal (CoA)

  Catalysed by SCLY, ACP2cytosol, mitochondrial matrix, lysosomeOne of 2 routes

• (2E)-dodecenoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. (2E)-dodecenoyl-CoA formation

  Catalysed by SCLYcytosol, mitochondrial matrixOne of 3 routes

• 4,8,12-trimethyltridecanoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. propanoyl-CoA C-acyltransferase (3-ketopristanoyl-CoA)

  Catalysed by SCLY, ACAA1, MYO5Bcytosol, mitochondrial matrix, peroxisomeOne of 2 routes

• (6Z,9Z,12Z)-octadecatrienoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. long-chain-fatty-acid-CoA ligase (gamma-linolenate)

  Catalysed by SCLY, SLC27A2, ACSL4, ACSL3 and 5 morecytosol, mitochondrial matrixOne of 7 routes

• butanoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. Butanoate:CoA ligase (AMP-forming)

  Catalysed by SCLY, ACSM4, ACSM1, ACSM2A and 3 morecytosol, mitochondrial matrixOne of 9 routes

• dodecanoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. long-chain-fatty-acid-CoA ligase (lauric acid)

  Catalysed by SCLY, SLC27A2, ACSL4, ACSL3 and 5 morecytosol, mitochondrial matrixOne of 9 routes

• glutaryl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. Production of Glutaryl Carnitine

  Catalysed by SCLY, CPT1A, CPT1C, CPT1Bcytosol, mitochondrial matrixOne of 2 routes

• eicosanoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. long-chain-fatty-acid-CoA ligase (eicosanoate)

  Catalysed by SCLY, SLC27A2, ACSL4, ACSL3 and 5 morecytosol, mitochondrial matrixOne of 12 routes

• itaconyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. Itaconate:CoA ligase (GDP-forming)

  Catalysed by SCLY, SUCLG1, SUCLG2, SUCLA2cytosol, mitochondrial matrixOne of 2 routes

• (9Z,12Z)-octadecadienoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. long-chain-fatty-acid-CoA ligase ((6Z,9Z)-octadecadienoic acid)

  Catalysed by SCLY, SLC27A2, ACSL4, ACSL3 and 5 morecytosol, mitochondrial matrixOne of 13 routes

• tetradecanoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. long-chain-fatty-acid-CoA ligase (myristic acid)

  Catalysed by SCLY, SLC27A2, ACSL4, ACSL3 and 5 morecytosol, mitochondrial matrixOne of 11 routes

• octanoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. Octanoyl-CoA:L-carnitine O-octanoyltransferase

  Catalysed by SCLY, CROTcytosol, mitochondrial matrixOne of 20 routes

• phytanoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. phytanate-CoA ligase

  Catalysed by SCLYcytosol, mitochondrial matrixOne of 5 routes

• octadecanoyl-CoAReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. amino-acid N-acetyltransferase (N-acetyl-L-alanine)
  3. long-chain-fatty-acid-CoA ligase (stearate)

  Catalysed by SCLY, SLC27A2, ACSL4, ACSL3 and 4 morecytosol, mitochondrial matrixOne of 15 routes

• prostaglandin H2Reach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. Mo-molybdopterin + L-cysteine + AH2 = thio-Mo-molybdopterin + L-alanine + A + H2O
  3. (5Z,8Z,11Z,14Z)-eicosatetraenoate + AH2 + 2 O2 = prostaglandin H2 + A + H2O

  Catalysed by SCLY, MOCOS, PTGS1, PTGS2cytosolOne of 2 routes

• (15S)-hydroxy-(5Z,8Z,11Z,13E)-eicosatetraenoateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. Mo-molybdopterin + L-cysteine + AH2 = thio-Mo-molybdopterin + L-alanine + A + H2O
  3. (15S)-hydroperoxy-(5Z,8Z,11Z,13E)-eicosatetraenoate + AH2 = (15S)-hydroxy-(5Z,8Z,11Z,13E)-eicosatetraenoate + A + H2O

  Catalysed by SCLY, MOCOS, TBXAS1, PTGS2 and 1 morecytosol

• sarcosineReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. sarcosine + O2 + H2O = formaldehyde + glycine + H2O2

  Catalysed by SCLY, AGXT, AGXT2, PIPOXcytosol, mitochondrial matrixOne of 2 routes

• (6S)-5,6,7,8-tetrahydrofolateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. L-Alanine:glyoxylate aminotransferase
  3. (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + glycine + H2O = (6S)-5,6,7,8-tetrahydrofolate + L-serine

  Catalysed by SCLY, AGXT, AGXT2, SHMT1 and 1 morecytosol, mitochondrial matrix

• 2-(N(omega)-L-arginino)succinateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. transport of alanine and arginine (cytosol to extracellular)
  3. 2-(Nomega-L-arginino)succinate arginine-lyase (fumarate-forming)

  Catalysed by SCLY, SLC7A6, ASLcytosol, extracellular spaceOne of 6 routes

• carnosineReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. beta-alanine(out) + L-alanine(in) = beta-alanine(in) + L-alanine(out)
  3. beta-alanine + L-histidine + ATP = carnosine + ADP + phosphate + H(+)

  Catalysed by SCLY, SLC7A10, CARNS1cytosol, inner side of the membrane, outer side of the membrane

• 4-guanidinobutanoateReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. transport of alanine and arginine (cytosol to extracellular)
  3. 4-aminobutanoate + L-arginine = 4-guanidinobutanoate + L-ornithine

  Catalysed by SCLY, SLC7A6, GATMcytosol, extracellular space

• L-dopaReach from here →
  1. L-selenocysteine selenide-lyase (L-alanine-forming)
  2. transport of alanine and phenylalanine (cytosol to extracellular)
  3. L-dopa(out) + L-phenylalanine(in) = L-dopa(in) + L-phenylalanine(out)

  Catalysed by SCLY, SLC7A5, SLC7A8cytosol, extracellular space, inner side of the membrane, outer side of the membraneOne of 2 routes