Pathway
Gastrulation
Gastrulation is the reorganization of the blastula to form the multilayered gastrula. During gastrulation, a portion of cells from the exterior of the epithelial epiblast layer migrate to the interior, where they form mesoderm and endoderm which, together with the outer layer of ectoderm (arising from epiblast cells that have not migrated), comprise the three cell layers that are characteristic of triploblastic metazoans (reviewed in Technau and Scholz 2003). In the human peri-implantation embryo, epiblast cells ingress through the primitive streak located in the posterior region of the embryonic disc to form the mesoderm and endoderm of the embryo proper (reviewed in Bardot and Hadjantonakis 2020, Ghimire et al. 2021, Zhai et al. 2021, Rossant and Tam 2022). In the mouse, a mammalian model organism, the embryo is cup-shaped instead of being disc-shaped (reviewed in Kojima et al. 2014). However, the morphogenetic process of germ layer formation is broadly conserved in both species.
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The primitive streak forms at the posterior region of the epiblast where there is high signaling activity of NODAL, BMP, FGF and WNT pathways, which drive the allocation of cells to the mesoderm and endoderm lineages. In the primitive streak, the ingressing cells undergo epithelial-to-mesenchymal transition (reviewed in Amack 2021). Cells allocated to the mesoderm acquire a mesenchymal phenotype. Endodermal cells are reputed to revert back to an epithelial architecture through a mesenchymal-to-epithelial transition as they are integrated into the pre-existing layer of hypoblast. A recent study in mouse, however, revealed that ingressing cells that are destined for the endoderm undergo an incomplete or partial-EMT and retain some epithelial features prior to re-acquiring epithelialization.
During gastrulation in mice, extraembryonic mesoderm is formed first and is followed by mesoderm that populates the anterior structures, the head, face and heart of the embryo and next the mesoderm to the trunk. Endoderm is also formed in an anterior to posterior sequence, with endoderm emerging early in gastrulation populating the foregut, followed by the mid- and hind-gut. Along the anterior-posterior axis of the primitive streak, endoderm and axial mesoderm emerge from the anterior region, whereas mesoderm emerging from the mid- to posterior regions is allocated in a medial-lateral order to paraxial, intermediate and lateral plate mesoderm. Cells remaining in the overlying epiblast contribute to the ectoderm. Cells of the ectoderm are allocated to the neural ectoderm and to the surface ectoderm and the neural border cells that give rise to the neural crest cells. Patterning of the neuroectoderm is facilitated by the inductive interaction with prechordal plate and the notochord derived from the axial mesoderm.
Before ingression, cells of the primitive streak express genes such as TBXT (T, BRACHYURY) and EOMES that are characteristic of nascent mesoderm and endoderm. It is not known if there are common progenitors that give rise to all types of mesodermal derivatives, such as lateral plate mesoderm and paraxial mesoderm. The knowledge to this date indicates that the different types of mesodermal derivatives are allocated in accordance to the timing and locality of emergence from the primitive streak. The existence of bipotential mesendoderm progenitors in the gastrulating embryo is unresolved but unlikely, though a bipotential cell population may be derived from mouse embryonic stem cells in vitro.
What the reference databases state
Statements
115 statements
115 statements · 1 reference database · Subject: Gastrulation · Sources: Reactome
- ADRM1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- BMP4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- CDH1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- CREBBP participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- CTNNB1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- CXCR4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- DLL1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- DLL3 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- DLX5 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- EOMES participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- EP300 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- EPHA4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
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- FGF2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FGF4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FGF8 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FGFR1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FOXA1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FOXA2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FOXC1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FOXC2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FOXF1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- FOXH1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- GATA4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- GATA6 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- GBX2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- GSC participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- HES7 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- IHH participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- KAT2A participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- KAT2B participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- LEF1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- LFNG participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- LHX1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MAML1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MAML2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MAML3 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MAMLD1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MESP2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MIXL1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MSGN1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MSX1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- MYB participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- NANOG participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- NOG participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- NOTCH1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- NOTO participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- OSR1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- OTX2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PAX2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PAX3 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PAX6 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PAX7 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PAX8 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- POU3F1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- POU5F1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMA1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMA2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMA3 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMA4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMA5 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMA6 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMA7 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMB1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMB2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMB3 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMB4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMB5 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMB6 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMB7 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMC1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMC2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMC3 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMC4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMC5 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMC6 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD11 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD12 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD13 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD14 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD3 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD6 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD7 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- PSMD8 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- RBPJ participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- RIPPLY2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SEM1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SHH participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SMAD2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SMAD3 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SMAD4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SNAI1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SNW1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SOX1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SOX17 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- SOX2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TBPL2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TBX6 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TBXT participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TCF7 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TCF7L1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TCF7L2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TEAD2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TEAD4 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TFAP2A participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TFAP2B participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TFAP2C participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- TRIM33 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- WNT3A participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- YAP1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- ZEB2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- ZIC1 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- ZIC2 participates in GastrulationProteinReactome R-HSA-9758941Inferred only
- ZNF521 participates in GastrulationProteinReactome R-HSA-9758941Inferred only