Pathway
Estrogen-dependent gene expression
Estrogens mediate their transcriptional effects through interaction with the estrogen receptors, ESR1 (also known as ER alpha) and ESR2 (ER beta). ESR1 and ESR2 share overlapping but distinct functions, with ESR1 playing the primary role in transcriptional activation in most cell types (Hah and Krauss, 2014; Haldosén et al, 2014. The receptors function as ligand-dependent dimers and can activate target genes either through direct binding to an estrogen responsive element (ERE) in the target gene promoter, or indirectly through interaction with another DNA-binding protein such as RUNX1, SP1, AP1 or NF-kappa beta (reviewed in Bai and Gust, 2009; Hah and Krause, 2014). Binding of estrogen receptors to the DNA promotes the assembly of higher order transcriptional complexes containing methyltransferases, histone acetyltransferases and other transcriptional activators, which promote transcription by establishing active chromatin marks and by recruiting general transcription factors and RNA polymerase II. ESR1- and estrogen-dependent recruitment of up to hundreds of coregulators has been demonstrated by varied co-immunoprecipitation and proteomic approaches (Kittler et al, 2013; Mohammed et al, 2013; Foulds et al, 2013; Mohammed et al, 2015; Liu et al, 2014; reviewed in Magnani and Lupien, 2014; Arnal, 2017). In some circumstances, ligand-bound receptors can also promote the assembly of a repression complex at a target gene, and in some cases, heterodimers of ESR1 and ESR2 serve as repressors of ESR1-mediated target gene activation (reviewed in Hah and Kraus, 2014; Arnal et al, 2017). Phosphorylation of the estrogen receptor also modulates its activity, and provides cross-talk between nuclear estrogen-dependent signaling and non-genomic estrogen signaling from the plasma membrane (reviewed in Anbalagan and Rowan, 2015; Halodsèn et al, 2014; Schwartz et al, 2016)
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A number of recent genome wide studies highlight the breadth of the transcriptional response to estrogen. The number of predicted estrogen-dependent target genes ranges from a couple of hundred (based on microarray studies) to upwards of 10000, based on ChIP-chip or ChIP-seq. Many of these predicted sites may not represent transcriptionally productive binding events, however. A study examining ESR1 binding by ChIP-seq in 20 primary breast cancers identified a core of 484 ESR-binding events that were conserved in at least 75% of ER+ tumors, which may represent a more realistic estimate. These studies also highlight the long-range effect of estrogen receptor-binding, with distal enhancer or promoter elements regulating the expression of many target genes, often through looping or other higher order chromatin structures (Kittler et al, 2013; reviewed in Dietz and Carroll, 2008; Liu and Cheung, 2014; Magnani and Lupien, 2014). Transcription from a number of estrogen-responsive target genes also appears to be primed by the binding of pioneering transcription factors such as FOXA1, GATA3, PBX1 among others. These factors bind to heterochromatin by virtue of their winged helix domains and promote chromatin opening, allowing subsequent recruitment of other transcription factors (reviewed in Zaret and Carroll, 2011; Fiorito et al, 2013; Arnal et al, 2017; Magnani et al, 2011)
What the reference databases state
Statements
115 statements
115 statements · 1 reference database · Subject: Estrogen-dependent gene expression · Sources: Reactome
- AGO1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- AGO2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- AGO3 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- AGO4 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- ATF2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- AXIN1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- BCL2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CARM1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CBFB participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CCND1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CCNT1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CDK9 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
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- CHD1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CITED1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CREBBP participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CTSD participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CXCL12 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- CXXC5 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- DDX5 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- EBAG9 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- EP300 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- ESR1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- FKBP4 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- FOS participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- FOSB participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- FOXA1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- GATA3 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- GPAM participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- GREB1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- GTF2A1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- GTF2A2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- GTF2F1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- GTF2F2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AB1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AC14 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AC18; H2AC19 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AC20 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AC4; H2AC8 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AC6 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AC7 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AJ participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AX participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2AZ2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC11 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC12 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC13 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC14 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC15 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC17 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC21 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC26 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC3 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC4; H2BC6; H2BC7; H2BC8; H2BC10 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H2BC9 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H3-3A; H3-3B participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8; H3C10; H3C11; H3C12 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H3C15; H3C14; H3C13 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9; H4C11; H4C12; H4C13; H4C14; H4C15; H4C16 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- HDAC1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- HSP90AA1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- HSP90AB1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- JUN participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- JUND participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- KANK1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- KAT2B participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- KAT5 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- KCTD6 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- KDM1A participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- KDM4B participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- KPNA2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- MED1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- MOV10 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- MYB participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- MYC participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- NCOA1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- NCOA2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- NCOA3 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- NR5A2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- NRIP1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- PGR participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2A participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2B participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2C participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2D participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2E participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2F participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2G participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2H participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2I participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2J participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2K participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POLR2L participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- POU2F1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- PRMT1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- PTGES3 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- RAD21 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- RUNX1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- SMC1A participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- SMC3 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- SP1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- STAG1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- STAG2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- TBP participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- TFF1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- TFF3 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- TGFA participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- TLE3 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- TNRC6A participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- TNRC6B participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- TNRC6C participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- USF1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- USF2 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- YY1 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only
- ZNF217 participates in Estrogen-dependent gene expressionProteinReactome R-HSA-9018519Inferred only