Pathway
Collagen biosynthesis and modifying enzymes
The biosynthesis of collagen is a multistep process. Collagen propeptides are cotranslationally translocated into the ER lumen. Propeptides undergo a number of post-translational modifications. Proline and lysine residues may be hydroxylated by prolyl 3-, prolyl 4- and lysyl hydroxylases. 4-hydroxyproline is essential for intramolecular hydrogen bonding and stability of the triple helical collagenous domain. In fibril forming collagens approximately 50% of prolines are 4-hydroxylated; the extent of this and of 3-hydroxyproline and lysine hydroxylation varies between tissues and collagen types (Kivirikko et al. 1972, 1992). Hydroxylysine molecules can form cross-links between collagen molecules in fibrils, and are sites for glycosyl- and galactosylation. Collagen peptides all have non-collagenous domains; collagens within the subclasses have common chain structures. These non-collagenous domains have regulatory functions; some are biologically active when cleaved from the main peptide chain. Fibrillar collagens all have a large triple helical domain (COL1) bordered by N and C terminal extensions, called the N and C propeptides, which are cleaved prior to formation of the collagen fibril. The C propeptide, also called the NC1 domain, is highly conserved. It directs chain association during intracellular assembly of the procollagen molecule from three collagen propeptide alpha chains. The N-propeptide has a short linker (NC2) connecting the main triple helix to a short minor one (COL2) and a globular N-terminal region NC3. NC3 domains are variable both in size and the domains they contain.
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Collagen propeptides typically undergo a number of post-translational modifications. Proline and lysine residues are hydroxylated by prolyl 3-, prolyl 4- and lysyl hydroxylases. 4-hydroxyproline is essential for intramolecular hydrogen bonding and stability of the triple helical collagenous domain. Prolyl 4-hydroxylase may also have a role in alpha chain association as no association of the C-propeptides of type XII collagen was seen in the presence of prolyl 4-hydroxylase inhibitors (Mazzorana et al. 1993, 1996). In fibril forming collagens approximately 50% of prolines are 4-hydroxylated; the extent of this is species dependent, lower hydroxylation correlating with lower ambient temperature and thermal stability. Similarly the extent of 3-hydroxyproline and lysine hydroxylation varies between tissues and collagen types. Hydroxylysine molecules can form cross-links between collagen molecules in fibrils, and are sites for glycosyl- and galactosylation.
Collagen molecules fold and assemble through a series of distinct intermediates. Individual collagen polypeptide chains are translocated co-translationally across the membrane of the endoplasmic reticulum (ER). Intra-chain disulfide bonds are formed within the N-propeptide, and hydroxylation of proline and lysine residues occurs within the triple helical domain. When the peptide chain is fully translocated into the ER lumen the C-propeptide folds, the conformation being stabilized by intra-chain disulfide bonds. Pro alpha-chains associate via the C-propeptides, or NC2 domains for FACIT family collagens to form an initial trimer which can be stabilized by the formation of inter-chain disulfide bonds, though these are not a prerequisite for further folding. The triple helix then nucleates and folds in a C- to N- direction. The association of the individual chains and subsequent triple helix formation are distinct steps. The N-propeptides associate and in some cases form inter-chain disulfide bonds. Procollagen is released via carriers into the exracellular space. Fibrillar procollagens undergo removal of the C- and N-propeptides by procollagen C and N proteinases respectively, both Zn2+ dependent metalloproteinases. Propeptide processing is a required step for normal collagen I and III fibril formation, but collagens can retain some or all of their non-collagenous propeptides. Retained collagen type V and XI N-propeptides contribute to the control of fibril growth by sterically limiting lateral molecule addition. Processed fibrillar procollagen is termed tropocollagen, which is considered to be the unit of higher order fibrils and fibres. Tropocollagens of the fibril forming collagens I, II, III, V and XI sponteneously aggregate in vitro in a manner that has been compared with crystallization, commencing with a nucleation event followed by subsequent organized aggregation. Fibril formation is stabilized by lysyl oxidase catalyzed crosslinks between adjacent molecules.
What the reference databases state
Statements
65 statements
65 statements · 1 reference database · Subject: Collagen biosynthesis and modifying enzymes · Sources: Reactome
- ADAMTS14 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- ADAMTS2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- BMP1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL10A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL11A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL11A2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL12A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL13A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL14A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL15A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL16A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL17A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
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- COL18A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL19A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL1A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL1A2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL20A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL21A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL22A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL23A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL24A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL25A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL26A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL27A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL28A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL2A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL3A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL4A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL4A2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL4A3 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL4A4 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL4A5 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL4A6 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL5A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL5A2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL5A3 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL6A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL6A2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL6A3 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL6A5 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL7A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL8A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL8A2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL9A1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL9A2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COL9A3 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COLGALT1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- COLGALT2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- CRTAP participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- P3H1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- P3H2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- P3H3 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- P4HA1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- P4HA2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- P4HA3 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- P4HB participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- PCOLCE participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- PCOLCE2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- PLOD1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- PLOD2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- PLOD3 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- PPIB participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- SERPINH1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- TLL1 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only
- TLL2 participates in Collagen biosynthesis and modifying enzymesProteinReactome R-HSA-1650814Inferred only