Compound
a ribonucleoside 5'-diphosphate
Trianion of nucleoside diphosphate arising from deprotonation of all three free OH groups of the diphosphate; major species at pH 7.3.
Definition from ChEBI (CHEBI:57930), read 2026-09-23. CC BY 4.0.
Structure
- Class
- Organic compound, anion
- Formula
- C5H8O10P2R
- Mass
- 290.059 g/mol
- Charge
- -3
- SMILES
- *[C@@H]1O[C@H](COP(=O)([O-])OP(=O)([O-])[O-])[C@@H](O)[C@H]1O
- Look it up
- ChEBI
Identity from ChEBI. Not evidence.
Reactions
18 reactions
tRNA(n+1)+hydrogenphosphatetRNA(n)+a ribonucleoside 5'-diphosphate
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:10628CC BY 4.0Reference data
a ribonucleoside 5'-triphosphate+AMPa ribonucleoside 5'-diphosphate+ADP(3-)
Catalysed by AK3
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:13749CC BY 4.0Reference data
CHEBI:76533+[(1->4)-alpha-D-glucosyl](n)[(1->4)-alpha-D-glucosyl](n+1)+a ribonucleoside 5'-diphosphate+hydron
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:15873CC BY 4.0Reference data
CHEBI:76533+D-fructosea ribonucleoside 5'-diphosphate+sucrose+hydron
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:16241CC BY 4.0Reference data
a ribonucleoside 5'-diphosphate+ATP(4-)a ribonucleoside 5'-triphosphate+ADP(3-)
Catalysed by NME4 or NME6 or AK1 or NME1 or NME2 or AK4 or CMPK1 or NME3 or CMPK2 or AK9 or AK7 or AK8 and 1 more alternative
Reaction pageLeft to rightBalance undeterminable
Rhea RHEA:18113CC BY 4.0Reference data
2'-deoxycytidine+a ribonucleoside 5'-triphosphatedCMP+a ribonucleoside 5'-diphosphate+hydron
Catalysed by DCK
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:20061CC BY 4.0Reference data
RNA(n+1)+hydrogenphosphateRNA(n)+a ribonucleoside 5'-diphosphate
Catalysed by PNPT1
Reaction pageLeft to rightBalance undeterminable
Rhea RHEA:22096CC BY 4.0Reference data
CHEBI:73316+[thioredoxin]-disulfide+watera ribonucleoside 5'-diphosphate+[thioredoxin]-dithiol
Catalysed by RRM1 or RRM2 or RRM2B
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:23252CC BY 4.0Reference data
a ribonucleoside 5'-triphosphate+watera ribonucleoside 5'-diphosphate+hydrogenphosphate+hydron
Catalysed by ENTPD3 or ENTPD1 or ENTPD8 or SMPDL3A or NTPCR or ENTPD7 or DDX20 or ENTPD4 or ENTPD2
Reaction pageLeft to rightBalance undeterminable
Rhea RHEA:23680CC BY 4.0Reference data
CHEBI:58043+ATP(4-)a ribonucleoside 5'-diphosphate+ADP(3-)
Catalysed by AK1 or AK4 or AK9
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:24036CC BY 4.0Reference data
a ribonucleoside 5'-diphosphate+waterCHEBI:58043+hydrogenphosphate+hydron
Catalysed by ENTPD6 or ENTPD3 or ENTPD5 or ENTPD1 or ENTPD8 or CANT1 or ENTPD4 or ENTPD2
Reaction pageLeft to rightBalance undeterminable
Rhea RHEA:36799CC BY 4.0Reference data
CHEBI:75483+a ribonucleoside 5'-triphosphateCHEBI:75434+a ribonucleoside 5'-diphosphate
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:38099CC BY 4.0Reference data
Other names
7 names
Resolves to: a ribonucleoside 5'-diphosphate
- Also called
- NDP trianionNDP(3-)NDP(3−)nucleoside diphosphate trianionribonucleoside diphosphate trianionribonucleoside diphosphate(3-)ribonucleoside diphosphate(3−)