Compound
5'-deoxyadenosine
A 5'-deoxyribonucleoside compound having adenosine as the nucleobase.
Definition from ChEBI (CHEBI:17319), read 2026-09-23. CC BY 4.0.
Structure
Loading the model…
- Class
- Organic compound
- Formula
- C10H13N5O3
- Mass
- 251.246 g/mol
- Charge
- 0
- InChIKey
- XGYIMTFOTBMPFP-KQYNXXCUSA-N
- SMILES
- C[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1O
- Look it up
- ChEBIPubChemBy InChIKey
Identity from ChEBI, geometry from PubChem. Not evidence.
What it touches on the way
Mechanistic reach
4 entities
4 entities reached.
0 reported hops4 assembled from the scaffold
What the reference databases state
Chemical structure
- 5'-deoxyadenosine has the functional parent adenosineCompoundChEBI CHEBI:17319Inferred only
Statements
4 statements
4 statements · 1 reference database · Subject: 5'-deoxyadenosine · Sources: Rhea
- 5'-deoxyadenosine is a substrate of CDKAL1ProteinRhea RHEA:37075Inferred only
- 5'-deoxyadenosine is a substrate of LIASProteinRhea RHEA:16585Inferred only
- 5'-deoxyadenosine is a substrate of MOCS1ProteinRhea RHEA:49576Inferred only
- 5'-deoxyadenosine is a substrate of RSAD2ProteinRhea RHEA:65944Inferred only
Reactions
81 reactions
Reaction pageReversibleBalance undeterminableextracellular space
Human-GEM MAR09298CC BY 4.0Reference data
5'-deoxyadenosine5'-deoxyadenosine
Reaction pageReversibleBalancedcytosol, extracellular space
Human-GEM MAR09637CC BY 4.0Reference data
MAM01098m5'-deoxyadenosine
Reaction pageReversibleBalancedmitochondrial matrix, cytosol
Human-GEM MAR20188CC BY 4.0Reference data
reduced [flavodoxin]+a menaquinone+2S-adenosyl-L-methioninean 8-methylmenaquinone+oxidized [flavodoxin]+5'-deoxyadenosine+L-methionine+S-adenosyl-L-homocysteine+3hydron
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:13341CC BY 4.0Reference data
coproporphyrinogen III+2S-adenosyl-L-methionineprotoporphyrinogen IX+25'-deoxyadenosine+2L-methionine+2carbon dioxide
Reaction pageDirection not assertedBalanced
Rhea RHEA:15425CC BY 4.0Reference data
2reduced [flavodoxin]+heme b+2S-adenosyl-L-methionineCHEBI:136517+2oxidized [flavodoxin]+iron(2+)+5'-deoxyadenosine+L-methionine+S-adenosyl-L-homocysteine
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:15429CC BY 4.0Reference data
[[Fe-S] cluster scaffold protein carrying a second [4Fe-4S](2+) cluster]+N(6)-octanoyl-L-lysyl-[protein]+2oxidized [2Fe-2S]-[ferredoxin]+2S-adenosyl-L-methionine+4hydron[[Fe-S] cluster scaffold protein]+N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein]+4Fe(3+)+2hydrogen sulfide+25'-deoxyadenosine+2L-methionine+2reduced [2Fe-2S]-[ferredoxin]
Catalysed by LIAS
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:16585CC BY 4.0Reference data
L-seryl-[sulfatase]+S-adenosyl-L-methionine3-oxo-L-alanyl-[sulfatase]+5'-deoxyadenosine+L-methionine+hydron
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:17609CC BY 4.0Reference data
glycyl-[formate C-acetyltransferase]+reduced [flavodoxin]+S-adenosyl-L-methionineglycin-2-yl radical-[formate C-acetyltransferase]+semiquinone [flavodoxin]+5'-deoxyadenosine+L-methionine+hydron
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:19225CC BY 4.0Reference data
CHEBI:149473+(sulfur carrier)-SH+2reduced [2Fe-2S]-[ferredoxin]+2S-adenosyl-L-methionine(sulfur carrier)-H+biotin+25'-deoxyadenosine+2L-methionine+2oxidized [2Fe-2S]-[ferredoxin]
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:22060CC BY 4.0Reference data
[protein] with 2 [4Fe-4S] clusters+sulfite+6AH2+2S-adenosyl-L-methionine[protein] with [8Fe-9S-C] cluster+5'-deoxyadenosine+L-methionine+6A+S-adenosyl-L-homocysteine+3water+8hydron
Reaction pageDirection not assertedBalance undeterminable
Rhea RHEA:22076CC BY 4.0Reference data
5-amino-1-(5-phospho-beta-D-ribosyl)imidazole+S-adenosyl-L-methionineCHEBI:58354+CO+5'-deoxyadenosine+formate+L-methionine+3hydron
Reaction pageDirection not assertedBalanced
Rhea RHEA:24840CC BY 4.0Reference data