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Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
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ReactionsRhea and Human-GEM, by subsystem
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Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

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Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

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Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Pathways

Names from Reactome and WikiPathways

pathways in the graph: 3,812

Filter pathways by name

#a b c d e f g h i j k l m n o p q r s t u v w x y z

3,701–3,800 of 3,812, alphabetically

Tyrosine catabolismReactomeR-HSA-8963684
Tyrosine kinase inhibitors in glioblastomaWikiPathways5494
Tyrosine metabolism and related disordersWikiPathways4506
TYSND1 cleaves peroxisomal proteinsReactomeR-HSA-9033500
Ub-specific processing proteasesReactomeR-HSA-5689880

More of the reference layer

Biological processes
Anatomy
Cell types
Organisms
Materials
Regulatory assessments
Diseases

Evidence: Compounds · Outcomes · Papers · Search

Ubiquinol biosynthesis

ReactomeR-HSA-2142789

Ubiquitin-dependent degradation of Cyclin DReactomeR-HSA-75815

Ubiquitin-Mediated Degradation of Phosphorylated Cdc25AReactomeR-HSA-69601

UCH proteinasesReactomeR-HSA-5689603

UDP derived sugars synthesis in fibroblastsWikiPathways5394

Ulcerative colitis signalingWikiPathways5174

Ultraconserved region 339 modulation of tumor suppressor microRNAs in cancerWikiPathways4284

Unblocking of NMDA receptors, glutamate binding and activationReactomeR-HSA-438066

UNC93B1 deficiency - HSEReactomeR-HSA-5602415

Uncoating of the HIV VirionReactomeR-HSA-162585

Unfolded protein responseWikiPathways4925

Unfolded Protein Response (UPR)ReactomeR-HSA-381119

Unwinding of DNAReactomeR-HSA-176974

Uptake and actions of bacterial toxinsReactomeR-HSA-5339562

Uptake and function of anthrax toxinsReactomeR-HSA-5210891

Uptake and function of diphtheria toxinReactomeR-HSA-5336415

Uptake of dietary cobalamins into enterocytesReactomeR-HSA-9758881

Urea cycleReactomeR-HSA-70635

Urea cycle and associated pathwaysWikiPathways4595

Urea cycle and metabolism of amino groupsWikiPathways497

Urea cycle and related diseasesWikiPathways4571

Urotensin II mediated signalingWikiPathways5158

Uterine natural killer cells and progesterone estrogen and chorionic gonadotropinWikiPathways5569

Utilization of Ketone BodiesReactomeR-HSA-77108

Valproic acid pathwayWikiPathways3871

Variant SLC6A14 may confer susceptibility towards obesityReactomeR-HSA-5619094

Variant SLC6A20 affecting amino acid transport contributes towards hyperglycinuria (HG) and iminoglycinuria (IG)ReactomeR-HSA-5660686

Variant SLC6A20 affecting neurotransmitter transport contributes towards hyperglycinuria (HG) and iminoglycinuria (IG)ReactomeR-HSA-5619101

Vasopressin regulated water reabsorptionWikiPathways5085

Vasopressin regulates renal water homeostasis via AquaporinsReactomeR-HSA-432040

Vasopressin-like receptorsReactomeR-HSA-388479

Vedolizumab therapy for inflammatory bowel diseaseWikiPathways5512

VEGF binds to VEGFR leading to receptor dimerizationReactomeR-HSA-195399

VEGF ligand-receptor interactionsReactomeR-HSA-194313

VEGFA VEGFR2 signalingWikiPathways3888

VEGFA-VEGFR2 PathwayReactomeR-HSA-4420097

VEGFR2 mediated cell proliferationReactomeR-HSA-5218921

VEGFR2 mediated vascular permeabilityReactomeR-HSA-5218920

Vesicle-mediated transportReactomeR-HSA-5653656

Vif-mediated degradation of APOBEC3GReactomeR-HSA-180585

Viral Infection PathwaysReactomeR-HSA-9824446

Viral Messenger RNA SynthesisReactomeR-HSA-168325

Viral mRNA TranslationReactomeR-HSA-192823

Viral RNP Complexes in the Host Cell NucleusReactomeR-HSA-168330

Viral strategies to evade IFIT actionReactomeR-HSA-9690722

Virus Assembly and ReleaseReactomeR-HSA-168268

Visual cycleWikiPathways5534

Visual phototransductionReactomeR-HSA-2187338

Vitamin A and carotenoid metabolismWikiPathways716

Vitamin A1 and A5 X pathwaysWikiPathways5397

Vitamin B1 (thiamin) metabolismReactomeR-HSA-196819

Vitamin B12 disordersWikiPathways4271

Vitamin B12 metabolismWikiPathways1533

Vitamin B2 (riboflavin) metabolismReactomeR-HSA-196843

Vitamin B5 (pantothenate) metabolismReactomeR-HSA-199220

Vitamin B6 activation to pyridoxal phosphateReactomeR-HSA-964975

Vitamin B6 dependent and responsive disordersWikiPathways4228

Vitamin C (ascorbate) metabolismReactomeR-HSA-196836

Vitamin D (calciferol) metabolismReactomeR-HSA-196791

Vitamin D in inflammatory diseasesWikiPathways4482

Vitamin D metabolismWikiPathways1531

Vitamin D receptor pathwayWikiPathways2877

Vitamin D sensitive calcium signaling in depressionWikiPathways4698

Vitamin E transportReactomeR-HSA-8877627

Vitamin K metabolism and activation of dependent proteinsWikiPathways5186

VitaminsReactomeR-HSA-211916

Vitamins A and D action mechanismsWikiPathways4342

VLDL assemblyReactomeR-HSA-8866423

VLDL clearanceReactomeR-HSA-8964046

VLDLR internalisation and degradationReactomeR-HSA-8866427

Voltage gated Potassium channelsReactomeR-HSA-1296072

Vpr-mediated induction of apoptosis by mitochondrial outer membrane permeabilizationReactomeR-HSA-180897

Vpr-mediated nuclear import of PICsReactomeR-HSA-180910

Vpu mediated degradation of CD4ReactomeR-HSA-180534

vRNA SynthesisReactomeR-HSA-192814

vRNP AssemblyReactomeR-HSA-192905

VxPx cargo-targeting to ciliumReactomeR-HSA-5620916

Warburg effect modulated by deubiquitinating enzymes and their substratesWikiPathways5216

Wax and plasmalogen biosynthesisReactomeR-HSA-8848584

Wax biosynthesisReactomeR-HSA-9640463

White fat cell differentiationWikiPathways4149

Wnt Beta catenin signaling and ARTD family membersWikiPathways5529

Wnt beta catenin signaling in leukemiaWikiPathways3658

Wnt Beta catenin signaling inhibitors in current and past clinical trialsWikiPathways5442

WNT ligand biogenesis and traffickingReactomeR-HSA-3238698

WNT mediated activation of DVLReactomeR-HSA-201688

Wnt signalingWikiPathways428

Wnt signaling and pluripotencyWikiPathways399

Wnt signaling in adult hippocampal neurogenesisWikiPathways5536

Wnt signaling in kidney diseaseWikiPathways4150

Wnt signaling NetPathWikiPathways363

WNT5:FZD7-mediated leishmania dampingReactomeR-HSA-9673324

WNT5A-dependent internalization of FZD2, FZD5 and ROR2ReactomeR-HSA-5140745

WNT5A-dependent internalization of FZD4ReactomeR-HSA-5099900

XAV939 stabilizes AXINReactomeR-HSA-5545619

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