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Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

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Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

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Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Pathways

Names from Reactome and WikiPathways

pathways in the graph: 3,812

Filter pathways by name

#a b c d e f g h i j k l m n o p q r s t u v w x y z

1,501–1,600 of 3,812, alphabetically

Glycosaminoglycan degradationWikiPathways4815
Glycosaminoglycan metabolismReactomeR-HSA-1630316
Glycosaminoglycan synthesis in fibroblastsWikiPathways5395
Glycosaminoglycan-protein linkage region biosynthesisReactomeR-HSA-1971475
Glycosphingolipid biosynthesisReactomeR-HSA-9840309

More of the reference layer

Biological processes
Anatomy
Cell types
Organisms
Materials
Regulatory assessments
Diseases

Evidence: Compounds · Outcomes · Papers · Search

Glycosphingolipid catabolism

ReactomeR-HSA-9840310

Glycosphingolipid metabolismWikiPathways5292

Glycosphingolipid metabolismReactomeR-HSA-1660662

Glycosphingolipid transportReactomeR-HSA-9845576

Glycosylation and related congenital defectsWikiPathways4521

Glycosylphosphatidyl inositol anchor pathwayWikiPathways5505

Glyoxylate metabolismWikiPathways5166

Glyoxylate metabolism and glycine degradationReactomeR-HSA-389661

GNAQ p R183Q drives capillary malformationWikiPathways5501

GNAQ pathways in port wine stainWikiPathways5437

Golgi Associated Vesicle BiogenesisReactomeR-HSA-432722

Golgi Cisternae Pericentriolar Stack ReorganizationReactomeR-HSA-162658

Golgi-to-ER retrograde transportReactomeR-HSA-8856688

GP1b-IX-V activation signallingReactomeR-HSA-430116

GPCR downstream signallingReactomeR-HSA-388396

GPCR ligand bindingReactomeR-HSA-500792

GPCRs class A rhodopsin likeWikiPathways455

GPCRs class B secretin likeWikiPathways334

GPCRs class C metabotropic glutamate pheromoneWikiPathways501

GPCRs otherWikiPathways117

GPER1 signalingReactomeR-HSA-9634597

GPR143 in melanocytes and retinal pigment epithelium cellsWikiPathways4941

GPR40 role in insulin secretionWikiPathways3958

GPVI-mediated activation cascadeReactomeR-HSA-114604

GRB2 events in EGFR signalingReactomeR-HSA-179812

GRB2 events in ERBB2 signalingReactomeR-HSA-1963640

GRB2:SOS provides linkage to MAPK signaling for IntegrinsReactomeR-HSA-354194

GRB7 events in ERBB2 signalingReactomeR-HSA-1306955

Growth factors and hormones in beta cell proliferationWikiPathways5385

Growth hormone receptor signalingReactomeR-HSA-982772

GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2ReactomeR-HSA-9762114

GSK3B-mediated proteasomal degradation of PD-L1(CD274)ReactomeR-HSA-9929356

GTP hydrolysis and joining of the 60S ribosomal subunitReactomeR-HSA-72706

Gut liver indole metabolism WikiPathways3627

H139Hfs13* PPM1K causes a mild variant of MSUDReactomeR-HSA-9912529

H19 Rb E2F1 and CDK beta catenin in colorectal cancerWikiPathways3969

Hair follicle development cytodifferentiation stage 3 of 3WikiPathways2840

Hair follicle development organogenesis stage 2 of 3WikiPathways2839

Hallmark of cancer metastasis and epithelial to mesenchymal transitionWikiPathways5469

Hallmark of cancer non mutational epigenetic reprogrammingWikiPathways5483

Hallmark of cancer sustaining proliferative signalingWikiPathways5475

HATs acetylate histonesReactomeR-HSA-3214847

HCMV Early EventsReactomeR-HSA-9609690

HCMV InfectionReactomeR-HSA-9609646

HCMV Late EventsReactomeR-HSA-9610379

HCN channelsReactomeR-HSA-1296061

HDAC6 interactions in the central nervous systemWikiPathways5426

HDACs deacetylate histonesReactomeR-HSA-3214815

HDL assemblyReactomeR-HSA-8963896

HDL clearanceReactomeR-HSA-8964011

HDL remodelingReactomeR-HSA-8964058

HDMs demethylate histonesReactomeR-HSA-3214842

HDR through Homologous Recombination (HRR)ReactomeR-HSA-5685942

HDR through Homologous Recombination (HRR) or Single Strand Annealing (SSA)ReactomeR-HSA-5693567

HDR through MMEJ (alt-NHEJ)ReactomeR-HSA-5685939

HDR through Single Strand Annealing (SSA)ReactomeR-HSA-5685938

Head and neck squamous cell carcinomaWikiPathways4674

Heart developmentWikiPathways1591

Hedgehog 'off' stateReactomeR-HSA-5610787

Hedgehog 'on' stateReactomeR-HSA-5632684

Hedgehog ligand biogenesisReactomeR-HSA-5358346

Hedgehog signalingWikiPathways47

Hedgehog signalingWikiPathways4249

Hematopoietic stem cell differentiationWikiPathways2849

Hematopoietic stem cell gene regulation by GABP alpha beta complexWikiPathways3657

Heme assimilationReactomeR-HSA-9927020

Heme biosynthesisWikiPathways561

Heme biosynthesisReactomeR-HSA-189451

Heme degradationReactomeR-HSA-189483

Heme signalingReactomeR-HSA-9707616

Hemesynthesis defects and porphyriasWikiPathways5169

Hemoglobin switching embryonic fetal and adultWikiPathways5605

HemostasisReactomeR-HSA-109582

Heparan sulfate/heparin (HS-GAG) metabolismReactomeR-HSA-1638091

Hepatitis B infectionWikiPathways4666

Hepatitis C and hepatocellular carcinomaWikiPathways3646

Hepatocyte growth factor receptor signalingWikiPathways313

Hereditary fructose intoleranceReactomeR-HSA-5657560

Hereditary leiomyomatosis and renal cell carcinoma pathwayWikiPathways4206

Heroin metabolismWikiPathways2645

Hfe effect on hepcidin productionWikiPathways3924

Hh mutants abrogate ligand secretionReactomeR-HSA-5387390

Hh mutants are degraded by ERADReactomeR-HSA-5362768

HHAT G278V doesn't palmitoylate Hh-NpReactomeR-HSA-5658034

HIF1A and PPARG in hypertrophic cardiomyopathyWikiPathways2456

High laminar flow shear stress activates signaling by PIEZO1 and PECAM1:CDH5:KDR in endothelial cellsReactomeR-HSA-9856530

Highly calcium permeable nicotinic acetylcholine receptorsReactomeR-HSA-629597

Highly calcium permeable postsynaptic nicotinic acetylcholine receptorsReactomeR-HSA-629594

Highly sodium permeable postsynaptic acetylcholine nicotinic receptorsReactomeR-HSA-629587

Hijack of ubiquitination by SARS CoV 2WikiPathways4860

HINT1 pathwayWikiPathways5523

HIPK2 in kidney fibrosisWikiPathways4751

Hippo Merlin signaling dysregulationWikiPathways4541

Hippo signaling regulationWikiPathways4540

Hippo YAP signalingWikiPathways4537

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