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ReactionsRhea and Human-GEM, by subsystem
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Reference

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Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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A reference for what the literature reports. Not medical advice.

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Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSource

Reactions

24,851–24,900 of 31,435, by identifier

5-methylaminomethyl-2-(Se-phospho)selenouridine(34) in tRNA + H2O = 5-methylaminomethyl-2-selenouridine(34) in tRNA + phosphate
Direction not assertedBalancedRhea 60176
D-fructose(out) + ATP + H2O = D-fructose(in) + ADP + phosphate + H(+)
Direction not assertedBalancedTransportRhea 60180
D-glucose(out) + ATP + H2O = D-glucose(in) + ADP + phosphate + H(+)
Direction not assertedBalancedTransportRhea 60184
N(6),N(6)-dimethyl-L-lysyl(9)-[histone H3] + 2 2-oxoglutarate + 2 O2 = L-lysyl(9)-[histone H3] + 2 formaldehyde + 2 succinate + 2 CO2
Left to rightBalance undeterminableRhea 60188
N(6),N(6)-dimethyl-L-lysyl(9)-[histone H3] + 2-oxoglutarate + O2 = N(6)-methyl-L-lysyl(9)-[histone H3] + formaldehyde + succinate + CO2
Left to rightBalance undeterminableRhea 60192
N(6)-methyl-L-lysyl(9)-[histone H3] + 2-oxoglutarate + O2 = L-lysyl(9)-[histone H3] + formaldehyde + succinate + CO2
Left to right

Balance undeterminable

Rhea 60196

N(6),N(6),N(6)-trimethyl-L-lysyl(9)-[histone H3] + 2 2-oxoglutarate + 2 O2 = N(6)-methyl-L-lysyl(9)-[histone H3] + 2 formaldehyde + 2 succinate + 2 CO2

Direction not assertedBalance undeterminableRhea 60200

N(6),N(6),N(6)-trimethyl-L-lysyl(9)-[histone H3] + 2-oxoglutarate + O2 = N(6),N(6)-dimethyl-L-lysyl(9)-[histone H3] + formaldehyde + succinate + CO2

Left to rightBalance undeterminableRhea 60204

N(6),N(6),N(6)-trimethyl-L-lysyl(4)-[histone H3] + 3 2-oxoglutarate + 3 O2 = L-lysyl(4)-[histone H3] + 3 formaldehyde + 3 succinate + 3 CO2

Direction not assertedBalance undeterminableRhea 60208

N(6),N(6),N(6)-trimethyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2

Direction not assertedBalance undeterminableRhea 60212

N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = N(6)-methyl-L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2

Direction not assertedBalance undeterminableRhea 60216

N(6)-methyl-L-lysyl(4)-[histone H3] + 2-oxoglutarate + O2 = L-lysyl(4)-[histone H3] + formaldehyde + succinate + CO2

Direction not assertedBalance undeterminableRhea 60220

N(6),N(6),N(6)-trimethyl-L-lysyl(27)-[histone H3] + 2 2-oxoglutarate + 2 O2 = N(6)-methyl-L-lysyl(27)-[histone H3] + 2 formaldehyde + 2 succinate + 2 CO2

Direction not assertedBalance undeterminableRhea 60224

N(6),N(6),N(6)-trimethyl-L-lysyl(27)-[histone H3] + 2-oxoglutarate + O2 = N(6),N(6)-dimethyl-L-lysyl(27)-[histone H3] + formaldehyde + succinate + CO2

Direction not assertedBalance undeterminableRhea 60228

N(6),N(6)-dimethyl-L-lysyl(27)-[histone H3] + 2-oxoglutarate + O2 = N(6)-methyl-L-lysyl(27)-[histone H3] + formaldehyde + succinate + CO2

Direction not assertedBalance undeterminableRhea 60232

N(6),N(6),N(6)-trimethyl-L-lysyl(36)-[histone H3] + 2 2-oxoglutarate + 2 O2 = N(6)-methyl-L-lysyl(36)-[histone H3] + 2 formaldehyde + 2 succinate + 2 CO2

Direction not assertedBalance undeterminableRhea 60236

N(6),N(6),N(6)-trimethyl-L-lysyl(36)-[histone H3] + 2-oxoglutarate + O2 = N(6),N(6)-dimethyl-L-lysyl(36)-[histone H3] + formaldehyde + succinate + CO2

Direction not assertedBalance undeterminableRhea 60240

N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + 2 A + 2 H2O = L-lysyl(4)-[histone H3] + 2 formaldehyde + 2 AH2

Left to rightBalance undeterminableRhea 60244

N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + A + H2O = N(6)-methyl-L-lysyl(4)-[histone H3] + formaldehyde + AH2

Left to rightBalance undeterminableRhea 60248

(S)-methylmalonyl-CoA + NADP(+) = acryloyl-CoA + CO2 + NADPH

Direction not assertedBalancedRhea 60252

N(6)-methyl-L-lysyl(4)-[histone H3] + A + H2O = L-lysyl(4)-[histone H3] + formaldehyde + AH2

Left to rightBalance undeterminableRhea 60256

L-lysyl(4)-[histone H3] + 3 S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(4)-[histone H3] + 3 S-adenosyl-L-homocysteine + 3 H(+)

Left to rightBalance undeterminableRhea 60260

L-lysyl(4)-[histone H3] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 60264

N(6)-methyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 60268

N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 60272

L-lysyl(9)-[histone H3] + 3 S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(9)-[histone H3] + 3 S-adenosyl-L-homocysteine + 3 H(+)

Left to rightBalance undeterminableRhea 60276

L-lysyl(9)-[histone H3] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl(9)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 60280

N(6)-methyl-L-lysyl(9)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(9)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 60284

N(6),N(6)-dimethyl-L-lysyl(9)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(9)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 60288

L-lysyl(27)-[histone H3] + 3 S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(27)-[histone H3] + 3 S-adenosyl-L-homocysteine + 3 H(+)

Direction not assertedBalance undeterminableRhea 60292

L-lysyl(27)-[histone H3] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl(27)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60296

N(6)-methyl-L-lysyl(27)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(27)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60300

N(6),N(6)-dimethyl-L-lysyl(27)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(27)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60304

L-lysyl(36)-[histone H3] + 2 S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(36)-[histone H3] + 2 S-adenosyl-L-homocysteine + 2 H(+)

Direction not assertedBalance undeterminableRhea 60308

L-lysyl(36)-[histone H3] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl(36)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60312

N(6)-methyl-L-lysyl(36)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(36)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60316

N(6),N(6)-dimethyl-L-lysyl(36)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(36)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60320

L-lysyl(36)-[histone H3] + 3 S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(36)-[histone H3] + 3 S-adenosyl-L-homocysteine + 3 H(+)

Left to rightBalance undeterminableRhea 60324

L-lysyl(79)-[histone H3] + 3 S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(79)-[histone H3] + 3 S-adenosyl-L-homocysteine + 3 H(+)

Direction not assertedBalance undeterminableRhea 60328

L-lysyl(79)-[histone H3] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl(79)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60332

N(6)-methyl-L-lysyl(79)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(79)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60336

N(6),N(6)-dimethyl-L-lysyl(79)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(79)-[histone H3] + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 60340

L-lysyl(20)-[histone H4] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 60344

N(6)-methyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 60348

2-heptyl-3-hydroxy-4(1H)-quinolone + O2 = N-octanoylanthranilate + CO + H(+)

Direction not assertedBalancedRhea 60352

N-octanoylanthranilate + H2O = anthranilate + octanoate + H(+)

Direction not assertedBalancedRhea 60356

oxidized coenzyme F420-0 + FMN + H(+) = dehydro coenzyme F420-0 + FMNH2

Direction not assertedBalancedRhea 60360

myo-inositol(out) + H(+)(out) = myo-inositol(in) + H(+)(in)

Direction not assertedBalancedTransportRhea 60364

urate(out) = urate(in)

ReversibleBalancedTransportRhea 60368

D-fructose(out) = D-fructose(in)

Direction not assertedBalancedTransportRhea 60372

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