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knowcompoundsnatamycinpage read from the graph 2026-11-02

Specimen compound organic compoundPlate I

Natamycin

Amphoteric macrolide antifungal antibiotic from Streptomyces natalensis or S. chattanoogensis.

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It is used for a variety of fungal infections, mainly topically.”

Nested hairline contours trace the electron density of one computed shape of natamycin, teal at the edge warming to amber over the atoms.

432 readings, by contour and nearest atom

fig. 1natamycin · promolecular electron density · PubChem CID 5284447, computed 3D conformer · atom and bond Gaussians, contours every e⅓
Formula
C33H47NO13
Molar mass
665.733 g/mol
PubChem CID
5284447
InChIKey
NCXMLFZGDNKEPB-FFPOYIOWSA-N

Structure

2D depiction · 3D model shown

Loading the model…

PubChem’s computed conformer of natamycin: one low-energy arrangement, not a measurement. Hydrogens are not drawn; the formula counts them.
Class
Organic compound
Formula
C33H47NO13
Mass
665.733 g/mol
Charge
0
InChIKey
NCXMLFZGDNKEPB-FFPOYIOWSA-N
SMILES
[H][C@@]12C[C@H](O)C[C@]3(O)C[C@H](O)[C@@H](C(=O)O)[C@]([H])(C[C@@H](O[C@@H]4O[C@H](C)[C@@H](O)[C@H](N)[C@@H]4O)/C=C/C=C/C=C/C=C/C[C@@H](C)OC(=O)/C=C/[C@H]1O2)O3

Identity from ChEBI, geometry from PubChem. Not evidence.

01 · the evidence, ordered

What the evidence says

Strong
0
Moderate
0
Limited
0
Very limited
0
Insufficient
2

How to read these marks

Fig. 2 natamycin CHEBI:74882 endpoints 2 findings on ring 1 ring 2 on requestSel natamycin · centre · ring 0
×1.00
Labels
CompoundInspector

natamycin

CHEBI:7488

Open the page

Findings drawn, by strength

2findings · 2 endpoints

  • Insufficient2

Most findings

  • ×1
  • ×1

ring 0 · 2 endpoints on ring 1

← → round a ring↑ ↓ out and inEnter selecte one more ringf fit to view+ − zoomEsc clearclick a node to select it

  1. Depletes oxalic acid
  2. Inhibits CAT
fig. 3 · 2 endpoints · 2 findings · one mark per findingno endpoint contested

02 · findings

What natamycin moved, and by how much

  • Dose studied: as its paper gave it. No dose is advised.
  • Evidence strength: computed from the study. How it is computed

2 rows · 2 findings in the record

  1. CATMoved: inhibitsEffect, as reportednot reportedEvidence: InsufficientPaper: PMID:371751192023
    Who
    Neofusicoccum parvum, fungal culture
    Dose studied
    not reported

    Furthermore, natamycin can cause oxidative damage to the fungus, as evidenced by decreased superoxide dismutase and catalase enzyme activity.”

    Quoted verbatim from Natamycin Has an Inhibitory Effect on Neofusicoccum parvum, the Pathogen of Chestnuts.in vitro · not in humansPermalink
  2. Oxalic acidMoved: depletesEffect, as reportednot reportedEvidence: InsufficientPaper: PMID:380874292024
    Who
    Sclerotinia sclerotiorum, mycelial culture
    Dose studied
    not reported

    Natamycin markedly disrupted hyphal form, sclerotia formation, integrity of the cell membrane, and reduced the content of oxalic acid and ergosterol, whereas it increased the reactive oxygen species (ROS) and malondialdehyde content.”

    Quoted verbatim from Efficacy and toxic action of the natural product natamycin against Sclerotinia sclerotiorum.in vitro · not in humansPermalink

No dose is advised.

03 · figures · 1 plate

Plates

  • Hairline isopotential curves around one computed shape of natamycin, teal where the potential is negative and amber where it is positive.
    fig. 4natamycin · electrostatic potential, molecular plane · PubChem CID 5284447, computed 3D conformer · MMFF94 partial charges as point charges (approximate) · inside: promolecular density

04 · reach · hypothesis

What it touches on the way

1 entity · assembled from reference reactions

  1. CATProtein1 path · 1 endpointinferred only

05 · interactions

Taken with something else

Documented interactions
None reported

Pairs that share biology

What the reference databases state

Trials · ClinicalTrials.gov
3without posted results · 3 past the reporting window
All 3 registered trials

Registered, and not reported

Source
ClinicalTrials.gov
Intervention
natamycin
Status
Completed, terminated or suspended
Results posted
No

Trials without posted results

3 trials

3 registered trials without posted results · Overdue (FDAAA 801): 3

3 past the window0 within it, or no actual date

  • NCT06411314completed2023-07-26industrypast the reporting window
  • NCT05655689completed2023-01-01a university or hospitalpast the reporting window
  • NCT00516399terminated· The DSMC decided it appeared futile to attempt to demonstrate non-inferiority of povidone-iodine to Natamycin.2010-09a university or hospitalpast the reporting window

06 · the record

What was read to make this page

277

papers screened for natamycin

admitted
0
read and discarded
220
not read yet
57

The screening record, every paper and why

Sources cited

2 papers · 2 findings

2Show every paper cited

Other names · 22

antibiotic A-5283 · CL 12,625 · CL 12625 · E 235 · E-235 · pimaricin · pimaricine · tennecetin

systematic · (1R,3S,5R,7R,8E,12R,14E,16E,18E,20E,22R,24S,25R,26S)-22-[(3-amino-3,6-dideoxy-beta-D-mannopyranosyl)oxy]-1,3,26-trihydroxy-12-methyl-10-oxo-6,11,28-trioxatricyclo[22.3.1.0(5,7)]octacosa-8,14,16,18,20-pentaene-25-carboxylic acid

systematic · (1R,3S,5R,7R,8E,12R,14E,16E,18E,20E,22R,24S,25R,26S)-22-[(3-amino-3,6-dideoxy-β-D-mannopyranosyl)oxy]-1,3,26-trihydroxy-12-methyl-10-oxo-6,11,28-trioxatricyclo[22.3.1.05,7]octacosa-8,14,16,18,20-pentaene-25-carboxylic acid

sold as · Delvocid · Delvolan · Delvopos · Mycophyt · Myprozine · Myuprozine · Natacyn · Natajen · Natamatrix · Natamax · Pimafucin · Synogil

Measured, not recorded
134 endpoints
Papers about this node
26 papers

Measured, not recorded

Compound
natamycin
Endpoints measured
134 endpoints
Recorded as a finding
No
Show what was measured

Papers about it

Papers
26
Harvested for it
26
Read with it as the subject
15
Read with it as the comparator
1
In PubMed's chemical list: indexed, not dosed
25
A PubMed MeSH major topic: indexed, not dosed
10
Harvested for it26 papers

and 14 more.

Read with it as the subject15 papers

and 3 more.

Read with it as the comparator1 paper
In PubMed's chemical list: indexed, not dosed25 papers

and 13 more.

A PubMed MeSH major topic: indexed, not dosed10 papers