Skip to content

Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

Atlas Graph Twin Access

Search the graph

Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

Loading the page.

Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

The graph

Compounds
Outcomes
Proteins
Atlas
Interactions
Papers
Articles
Graph
Search

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases
Reactions
Reach

How it works

Mission
Method
Twin
How to read the evidence
Sources and licences

Build on it

Access
In your assistant
For agents
Query the graph
Bulk export

A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSource

Reactions

29,651–29,700 of 31,435, by identifier

a ganglioside GD3 (d18:1(4E)) + acetyl-CoA = a ganglioside Ac-O-7-GD3(d18:1(4E)) + CoA
Left to rightBalance undeterminableRhea 79499
3-(3,4-dihydroxyphenyl)propanoate + NAD(+) = (E)-caffeate + NADH + H(+)
Direction not assertedBalancedRhea 79503
phloretate + NAD(+) = (E)-4-coumarate + NADH + H(+)
Direction not assertedBalancedRhea 79507
dihydroferulate + NAD(+) = (E)-ferulate + NADH + H(+)
Direction not assertedBalancedRhea 79511
a ganglioside Ac-O-7-GD3 = a ganglioside Ac-O-8-GD3
Direction not assertedBalance undeterminableRhea 79515
a ganglioside Ac-O-7-GD3(d18:1(4E)) = a ganglioside Ac-O-8-GD3(d18:1(4E))
Direction not assertedBalance undeterminableRhea 79519
a ganglioside Ac-O-8-GD3 = a ganglioside Ac-O-9-GD3

Direction not assertedBalance undeterminableRhea 79523

a ganglioside Ac-O-8-GD3(d18:1(4E)) = a ganglioside Ac-O-9-GD3(d18:1(4E))

Direction not assertedBalance undeterminableRhea 79527

keto-D-fructose 6-phosphate + CTP + H(+) = CDP-6-keto-D-fructose + diphosphate

Direction not assertedBalancedRhea 79531

CDP-6-D-glucitol + NADP(+) = CDP-6-keto-D-fructose + NADPH + H(+)

Direction not assertedBalancedRhea 79535

2 Fe(III)-[cytochrome c] + formaldehyde + H2O = 2 Fe(II)-[cytochrome c] + formate + 3 H(+)

Direction not assertedBalance undeterminableRhea 79539

(S)-2-hydroxyglutarate(in) + (S)-malate(out) = (S)-2-hydroxyglutarate(out) + (S)-malate(in)

Direction not assertedBalancedTransportRhea 79543

cadaverine + acetyl-CoA = N-acetylcadaverine + CoA + H(+)

Direction not assertedBalancedRhea 79547

sym-homospermidine + acetyl-CoA = N(1)-acetyl-sym-homospermidine + CoA + H(+)

Direction not assertedBalancedRhea 79551

CMP-N-acetyl-beta-neuraminate + acetyl-CoA = CMP-N-acetyl-7-O-acetyl-beta-neuraminate + CoA

Left to rightBalancedRhea 79555

CMP-N-acetyl-7-O-acetyl-beta-neuraminate = CMP-N-acetyl-8-O-acetyl-beta-neuraminate

Direction not assertedBalancedRhea 79559

CMP-N-acetyl-8-O-acetyl-beta-neuraminate = CMP-N-acetyl-9-O-acetyl-beta-neuraminate

Direction not assertedBalancedRhea 79563

guanidine + H2O = urea + NH4(+)

Direction not assertedBalancedRhea 79567

L-arginine + ADP + phosphate + H(+) = L-citrulline + NH4(+) + ATP

Direction not assertedBalancedRhea 79571

a ganglioside Ac-O-9-GD3(d18:1(4E)) + UDP-N-acetyl-alpha-D-galactosamine = a ganglioside Ac-O-9-GD2(d18:1(4E)) + UDP + H(+)

Direction not assertedBalance undeterminableRhea 79575

a ganglioside Ac-O-9-GD3 + UDP-N-acetyl-alpha-D-galactosamine = a ganglioside Ac-O-9-GD2 + UDP + H(+)

Direction not assertedBalance undeterminableRhea 79579

a ganglioside GT3 + acetyl-CoA = a ganglioside Ac-O-7-GT3 + CoA

Direction not assertedBalance undeterminableRhea 79583

3,17-didehydrostemmadenine = 17-dehydropreakuammicine

Direction not assertedBalancedRhea 79587

17-dehydropreakuammicine + H2O = 17-dehydropreakuammicine hydrate

Direction not assertedBalancedRhea 79591

17-dehydropreakuammicine hydrate = akuammicine + formate + H(+)

Direction not assertedBalancedRhea 79595

norajmaline + S-adenosyl-L-methionine = ajmaline + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 79599

4-methylnorajmaline + S-adenosyl-L-methionine = 4-methylajmaline + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 79603

a ganglioside Ac-O-7-GT3 = a ganglioside Ac-O-8-GT3

Direction not assertedBalance undeterminableRhea 79607

a ganglioside Ac-O-8-GT3 = a ganglioside Ac-O-9-GT3

Direction not assertedBalance undeterminableRhea 79611

rhazimol + NADP(+) = rhazimal + NADPH + 2 H(+)

Direction not assertedBalancedRhea 79615

(19E)-geissoschizine + reduced [NADPH--hemoprotein reductase] + O2 = rhazimal + oxidized [NADPH--hemoprotein reductase] + 2 H2O + H(+)

Direction not assertedBalance undeterminableRhea 79619

rhazimol + acetyl-CoA = akuammiline + CoA + H(+)

Direction not assertedBalancedRhea 79623

norajmaline + S-adenosyl-L-methionine = 4-methylnorajmaline + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 79627

ajmaline + S-adenosyl-L-methionine = 4-methylajmaline + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 79631

(20S)-19,20-dihydrovomilenine + NADP(+) = vomilenine + NADPH + H(+)

Direction not assertedBalancedRhea 79635

a ganglioside GD2 + acetyl-CoA = a ganglioside Ac-O-7-GD2 + CoA

Direction not assertedBalance undeterminableRhea 79639

a ganglioside Ac-O-7-GD2 = a ganglioside Ac-O-8-GD2

Direction not assertedBalance undeterminableRhea 79643

a ganglioside Ac-O-8-GD2 = a ganglioside Ac-O-9-GD2

Direction not assertedBalance undeterminableRhea 79647

3-oxoadipate + acetyl-CoA = acetoacetate + succinyl-CoA

Direction not assertedBalancedRhea 79651

3,5-dioxohexanoate + acetyl-CoA = acetoacetyl-CoA + acetoacetate

Direction not assertedBalancedRhea 79655

(2R,3R,5R)-2-(S-pantetheinyl)-carbapenam-3-carboxylate + AH2 + 2 S-adenosyl-L-methionine = (2R,3R,5S,6R)-6-(methyl)-2-(S-pantetheinyl)-carbapenam-3-carboxylate + 5'-deoxyadenosine + L-methionine + A + S-adenosyl-L-homocysteine + 2 H(+)

Direction not assertedBalancedRhea 79659

(2R,3R,5S,6R)-6-(methyl)-2-(S-pantetheinyl)-carbapenam-3-carboxylate + AH2 + 2 S-adenosyl-L-methionine = (2R,3R,5S,6R)-6-(ethyl)-2-(S-pantetheinyl)-carbapenam-3-carboxylate + 5'-deoxyadenosine + L-methionine + A + S-adenosyl-L-homocysteine + 2 H(+)

Direction not assertedBalancedRhea 79663

a ganglioside GT1balpha + CMP-N-acetyl-beta-neuraminate = a ganglioside GQ1b alpha + CMP + H(+)

Direction not assertedBalance undeterminableRhea 79667

a ganglioside GT1a alpha + CMP-N-acetyl-beta-neuraminate = a ganglioside GQ1b alpha + CMP + H(+)

Direction not assertedBalance undeterminableRhea 79671

a ganglioside Fuc-GA1 + UDP-alpha-D-galactose = a ganglioside Gal-(Fuc)-GA1 + UDP + H(+)

Direction not assertedBalance undeterminableRhea 79675

a ganglioside Gal-(Fuc)-GA1 + UDP-N-acetyl-alpha-D-galactosamine = a ganglioside GalNAcGal-(Fuc)-GA1 + UDP + H(+)

Direction not assertedBalance undeterminableRhea 79679

a ganglioside GM1b + UDP-N-acetyl-alpha-D-galactosamine = a ganglioside GalNAc-GM1b + UDP + H(+)

Direction not assertedBalance undeterminableRhea 79683

(2E,6E,10E,14E)-geranylfarnesyl diphosphate = variecoladiene + diphosphate

Direction not assertedBalancedRhea 79687

variecoladiene + 4 reduced [NADPH--hemoprotein reductase] + 4 O2 = variecolin + 4 oxidized [NADPH--hemoprotein reductase] + 6 H2O + 4 H(+)

Direction not assertedBalance undeterminableRhea 79691

(3S)-3-hydroxy-N(6),N(6),N(6)-trimethyl-L-lysine = 4-(trimethylamino)butanal + glycine

Left to rightBalancedRhea 79695

Page 594 of 629