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Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

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Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

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Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSource

Reactions

25,201–25,250 of 31,435, by identifier

5-aminopentanal = 1-piperideine + H2O
Direction not assertedBalancedRhea 61628
5-aminopentanal + NAD(+) + H2O = 5-aminopentanoate + NADH + 2 H(+)
Direction not assertedBalancedRhea 61632
isophthalate + ATP + CoA = isophthalyl-CoA + AMP + diphosphate
Direction not assertedBalancedRhea 61636
isophthalyl-CoA + H(+) = benzoyl-CoA + CO2
Direction not assertedBalancedRhea 61640
N(omega)-hydroxy-L-arginine + 2 Fe(II)-[cytochrome b5] + 2 H(+) = L-arginine + 2 Fe(III)-[cytochrome b5] + H2O
Left to rightBalance undeterminableRhea 61644
salicylate + holo-[ACP] + ATP = salicyl-[ACP] + AMP + diphosphate
Direction not assertedBalance undeterminableRhea 61648
2,3-dihydroxybenzoate + holo-[ACP] + ATP = 2,3-dihydroxybenzoyl-[ACP] + AMP + diphosphate

Direction not assertedBalance undeterminableRhea 61652

(2E,6E)-farnesol + ATP = (2E,6E)-farnesyl phosphate + ADP + H(+)

Direction not assertedBalancedRhea 61656

(2E)-geraniol + ATP = (2E)-geranyl phosphate + ADP + H(+)

Direction not assertedBalancedRhea 61660

(2E,6E,10E)-geranylgeraniol + ATP = (2E,6E,10E)-geranylgeranyl phosphate + ADP + H(+)

Direction not assertedBalancedRhea 61664

salicylate + ATP + CoA = 2-hydroxybenzoyl-CoA + AMP + diphosphate

Direction not assertedBalancedRhea 61668

L-cysteine + ATP + H(+) = L-cysteinyl-5'-AMP + diphosphate

Direction not assertedBalancedRhea 61672

L-cysteinyl-5'-AMP + holo-[peptidyl-carrier protein] = L-cysteinyl-[peptidyl-carrier protein] + AMP + H(+)

Direction not assertedBalance undeterminableRhea 61676

holo-[peptidyl-carrier protein] + L-cysteine + ATP = L-cysteinyl-[peptidyl-carrier protein] + AMP + diphosphate

Direction not assertedBalance undeterminableRhea 61680

glycero-2-phosphocholine + H2O = phosphocholine + glycerol + H(+)

Left to rightBalancedRhea 61684

holo-[peptidyl-carrier protein] + L-threonine + ATP = L-threonyl-[peptidyl-carrier protein] + AMP + diphosphate

Direction not assertedBalance undeterminableRhea 61688

L-threonyl-5'-AMP + holo-[peptidyl-carrier protein] = L-threonyl-[peptidyl-carrier protein] + AMP

Direction not assertedBalance undeterminableRhea 61692

holo-[peptidyl-carrier protein] + glycine + ATP = glycyl-[peptidyl-carrier protein] + AMP + diphosphate

Direction not assertedBalance undeterminableRhea 61696

glycyl-5'-AMP + holo-[peptidyl-carrier protein] = glycyl-[peptidyl-carrier protein] + AMP + H(+)

Direction not assertedBalance undeterminableRhea 61700

holo-[peptidyl-carrier protein] + L-serine + ATP = L-seryl-[peptidyl-carrier protein] + AMP + diphosphate

Direction not assertedBalance undeterminableRhea 61704

L-seryl-5'-AMP + holo-[peptidyl-carrier protein] = L-seryl-[peptidyl-carrier protein] + AMP

Direction not assertedBalance undeterminableRhea 61708

N(omega)-hydroxy-N(delta)-methyl-L-arginine + 2 Fe(II)-[cytochrome b5] + 2 H(+) = N(delta)-methyl-L-arginine + 2 Fe(III)-[cytochrome b5] + H2O

Direction not assertedBalance undeterminableRhea 61712

D-galactofuranose(out) + ATP + H2O = D-galactofuranose(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 61716

a D-guloside + NAD(+) = a 3-dehydro-D-guloside + NADH + H(+)

Direction not assertedBalance undeterminableRhea 61720

a D-glucoside + NAD(+) = a 3-dehydro-D-glucoside + NADH + H(+)

Direction not assertedBalance undeterminableRhea 61724

a 3-dehydro-D-guloside = a 3-dehydro-D-glucoside

Direction not assertedBalance undeterminableRhea 61728

steviol + UDP-alpha-D-glucose = steviolmonoside + UDP + H(+)

Direction not assertedBalancedRhea 61732

steviolmonoside + UDP-alpha-D-glucose = rubusoside + UDP

Direction not assertedBalancedRhea 61736

steviolmonoside + UDP-alpha-D-glucose = steviolbioside + UDP + H(+)

Direction not assertedBalancedRhea 61740

steviolbioside + UDP-alpha-D-glucose = stevioside + UDP

Direction not assertedBalancedRhea 61744

rubusoside + UDP-alpha-D-glucose = stevioside + UDP + H(+)

Direction not assertedBalancedRhea 61748

steviolbioside + UDP-alpha-D-glucose = rebaudioside B + UDP + H(+)

Direction not assertedBalancedRhea 61752

stevioside + UDP-alpha-D-glucose = rebaudioside A + UDP + H(+)

Direction not assertedBalancedRhea 61756

rebaudioside B + UDP-alpha-D-glucose = rebaudioside A + UDP

Direction not assertedBalancedRhea 61760

stevioside + UDP-alpha-D-glucose = rebaudioside E + UDP + H(+)

Direction not assertedBalancedRhea 61764

rebaudioside A + UDP-alpha-D-glucose = rebaudioside D + UDP + H(+)

Direction not assertedBalancedRhea 61768

rebaudioside E + UDP-alpha-D-glucose = rebaudioside D + UDP + H(+)

Direction not assertedBalancedRhea 61772

rebaudioside D + UDP-alpha-D-glucose = rebaudioside M + UDP + H(+)

Direction not assertedBalancedRhea 61776

keto-L-tagatose = keto-L-sorbose

Direction not assertedBalancedRhea 61780

L-allulose = keto-L-fructose

Direction not assertedBalancedRhea 61784

holo-[peptidyl-carrier protein] + L-tryptophan + ATP = L-tryptophyl-[peptidyl-carrier protein] + AMP + diphosphate

Direction not assertedBalance undeterminableRhea 61788

L-tryptophan + ATP = L-tryptophyl-5'-AMP + diphosphate

Direction not assertedBalancedRhea 61792

L-tryptophyl-5'-AMP + holo-[peptidyl-carrier protein] = L-tryptophyl-[peptidyl-carrier protein] + AMP

Direction not assertedBalance undeterminableRhea 61796

holo-[peptidyl-carrier protein] + L-alanine + ATP = L-alanyl-[peptidyl-carrier protein] + AMP + diphosphate

Direction not assertedBalance undeterminableRhea 61800

L-alanine + ATP + H(+) = L-alanyl-5'-AMP + diphosphate

Direction not assertedBalancedRhea 61804

L-alanyl-5'-AMP + holo-[peptidyl-carrier protein] = L-alanyl-[peptidyl-carrier protein] + AMP + H(+)

Direction not assertedBalance undeterminableRhea 61808

3beta-hydroxyandrost-5-en-17-one + UDP-alpha-D-glucose = dehydroepiandrosterone 3-beta-D-glucoside + UDP + H(+)

Direction not assertedBalancedRhea 61812

16,17-didehydropregnenolone + UDP-alpha-D-glucose = 16,17-didehydropregnenolone 3-beta-D-glucoside + UDP + H(+)

Direction not assertedBalancedRhea 61816

3beta-hydroxy-5alpha-androstan-17-one + UDP-alpha-D-glucose = epiandrosterone 3-beta-D-glucoside + UDP + H(+)

Direction not assertedBalancedRhea 61820

pregnenolone + UDP-alpha-D-glucose = pregnenolone 3-beta-D-glucoside + UDP + H(+)

Direction not assertedBalancedRhea 61824

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