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Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

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Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

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Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSourceClear

Reactions

4,501–4,550 of 18,558 reactions from Rhea

H2O(in) = H2O(out)
Direction not assertedBalancedTransportRhea 29667
Ca(2+)(in) = Ca(2+)(out)
Right to leftBalancedTransportRhea 29671
glycerol(in) = glycerol(out)
Direction not assertedBalancedTransportRhea 29675
formate(in) = formate(out)
Direction not assertedBalancedTransportRhea 29679
alpha-maltohexaose + phosphate = alpha-maltopentaose + alpha-D-glucose 1-phosphate
Direction not assertedBalancedRhea 29683
alpha-maltoheptaose + phosphate = alpha-maltohexaose + alpha-D-glucose 1-phosphate
Direction not assertedBalancedRhea 29687
alpha-maltotetraose + phosphate = alpha-maltotriose + alpha-D-glucose 1-phosphate

? Direction not asserted

Balanced

Rhea 29691

dimethyl sulfoxide(in) = dimethyl sulfoxide(out)

Direction not assertedBalancedTransportRhea 29699

L-valine(in) = L-valine(out)

Direction not assertedBalancedTransportRhea 29703

cadaverine(in) + H(+)(in) = cadaverine(out) + H(+)(out)

Direction not assertedBalancedTransportRhea 29711

2-hydroxyethane-1-sulfonate + FMNH2 + O2 = glycolaldehyde + FMN + sulfite + H2O + 2 H(+)

Direction not assertedBalancedRhea 29715

glyoxylate(in) = glyoxylate(out)

Direction not assertedBalancedTransportRhea 29723

ethane-1-sulfonate + FMNH2 + O2 = acetaldehyde + FMN + sulfite + H2O + 2 H(+)

Direction not assertedBalancedRhea 29727

beta-maltose(in) = beta-maltose(out)

Direction not assertedBalancedTransportRhea 29731

butane-1-sulfonate + FMNH2 + O2 = butanal + FMN + sulfite + H2O + 2 H(+)

Direction not assertedBalancedRhea 29735

2-phenylethylamine(in) = 2-phenylethylamine(out)

Direction not assertedBalancedTransportRhea 29743

3-phenylpropanoate(in) = 3-phenylpropanoate(out)

Direction not assertedBalancedTransportRhea 29747

acetoacetate(in) = acetoacetate(out)

Direction not assertedBalancedTransportRhea 29751

(R)-lipoate(in) = (R)-lipoate(out)

Direction not assertedBalancedTransportRhea 29755

octanoate(in) = octanoate(out)

Direction not assertedBalancedTransportRhea 29759

L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimelate(out) + ATP + H2O = L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimelate(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29763

D-methionine(out) + ATP + H2O = D-methionine(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29767

arsenate(in) + ATP + H2O = arsenate(out) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29771

alpha-D-ribose 1-phosphate + ATP = alpha-D-ribose 1,5-bisphosphate + ADP + H(+)

Direction not assertedBalancedRhea 29775

L-methionine(out) + ATP + H2O = L-methionine(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29779

L-cysteine(in) + ATP + H2O = L-cysteine(out) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29783

glutathione(in) + ATP + H2O = glutathione(out) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29787

glutathione(out) + ATP + H2O = glutathione(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29791

Zn(2+)(out) + ATP(in) + H2O(in) = Zn(2+)(in) + ADP(in) + phosphate(in) + H(+)(in)

Direction not assertedBalancedTransportRhea 29795

D-allose(out) + ATP + H2O = D-allose(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29799

L-valine(out) + ATP + H2O = L-valine(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29803

L-leucine(out) + ATP + H2O = L-leucine(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29807

thiamine(out) + ATP + H2O = thiamine(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29811

L-proline(out) + ATP + H2O = L-proline(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29815

L-isoleucine(out) + ATP + H2O = L-isoleucine(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29819

chloride(in) = chloride(out)

Right to leftBalancedTransportRhea 29823

Mg(2+)(in) = Mg(2+)(out)

Direction not assertedBalancedTransportRhea 29827

Ni(2+)(in) = Ni(2+)(out)

Direction not assertedBalancedTransportRhea 29831

D-galactonate(in) + H(+)(in) = D-galactonate(out) + H(+)(out)

Direction not assertedBalancedTransportRhea 29835

L-idonate + NADP(+) = 2-dehydro-L-idonate + NADPH + H(+)

Direction not assertedBalancedRhea 29839

propanoate + ATP + CoA = propanoyl-CoA + ADP + phosphate

Direction not assertedBalancedRhea 29843

(2E)-tetradecenoyl-CoA = (3Z)-tetradecenoyl-CoA

Right to leftBalancedRhea 29847

UDP-N-acetyl-alpha-D-galactosamine + H2O = N-acetyl-alpha-D-galactosamine 1-phosphate + UMP + 2 H(+)

Direction not assertedBalancedRhea 29851

L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine + H2O = L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimelate + D-alanine

Direction not assertedBalancedRhea 29855

5'-deoxyadenosine + H2O = 5-deoxy-D-ribose + adenine

Direction not assertedBalancedRhea 29859

GTP + AMP = GDP + ADP

Direction not assertedBalancedRhea 29863

ITP + AMP = IDP + ADP

Direction not assertedBalancedRhea 29867

thiosulfate(out) + ATP + H2O = thiosulfate(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29871

sn-glycero-3-phospho-L-serine + H2O = sn-glycerol 3-phosphate + L-serine + H(+)

Direction not assertedBalancedRhea 29875

L-arginine(out) + ATP + H2O = L-arginine(in) + ADP + phosphate + H(+)

Direction not assertedBalancedTransportRhea 29879

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