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ReactionsRhea and Human-GEM, by subsystem
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Reference

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Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSourceClear

Reactions

17,201–17,250 of 18,558 reactions from Rhea

ent-copalyl diphosphate = ent-(12E)-labda-8(17),12,14-triene + diphosphate
Direction not assertedBalancedRhea 81223
(2S,3R)-diaminobutanoate = (2S,3S)-diaminobutanoate
Direction not assertedBalancedRhea 81227
ent-copalyl diphosphate + H2O = 16alpha-hydroxy-ent-kaurene + diphosphate
Direction not assertedBalancedRhea 81231
(2-aminoethyl)phosphonate + O2 + H2O = phosphonoacetaldehyde + H2O2 + NH4(+)
Direction not assertedBalancedRhea 81235
2-(methylaminoethyl)phosphonate + O2 + H2O = phosphonoacetaldehyde + methylamine + H2O2
Direction not assertedBalancedRhea 81239
2-(dimethylaminoethyl)phosphonate + O2 + H2O = phosphonoacetaldehyde + dimethylamine + H2O2
Direction not assertedBalancedRhea 81243
4-hydroxy-3-(all-trans-heptaprenyl)benzoate + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 3,4-dihydroxy-5-(all-trans-heptaprenyl)benzoate + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81247

4-hydroxy-3-(all-trans-octaprenyl)benzoate + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 3,4-dihydroxy-5-(all-trans-octaprenyl)benzoate + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81251

4-hydroxy-3-(all-trans-nonaprenyl)benzoate + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 3,4-dihydroxy-5-(all-trans-nonaprenyl)benzoate + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81255

4-hydroxy-3-(all-trans-decaprenyl)benzoate + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 3,4-dihydroxy-5-(all-trans-decaprenyl)benzoate + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81259

4-hydroxy-3-methoxy-5-(all-trans-heptaprenyl)benzoate + H(+) = 2-methoxy-6-(all-trans-heptaprenyl)phenol + CO2

Direction not assertedBalancedRhea 81263

4-hydroxy-3-methoxy-5-(all-trans-octaprenyl)benzoate + H(+) = 2-methoxy-6-(all-trans-octaprenyl)phenol + CO2

Direction not assertedBalancedRhea 81267

4-hydroxy-3-methoxy-(5-all-trans-nonaprenyl)benzoate + H(+) = 2-methoxy-6-(all-trans-nonaprenyl)phenol + CO2

Direction not assertedBalancedRhea 81271

4-hydroxy-3-methoxy-5-(all-trans-decaprenyl)benzoate + H(+) = 2-methoxy-6-(all-trans-decaprenyl)phenol + CO2

Direction not assertedBalancedRhea 81275

2-methoxy-6-(all-trans-hexaprenyl)phenol + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 2-methoxy-6-(all-trans-hexaprenyl)benzene-1,4-diol + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81279

2-methoxy-6-(all-trans-heptaprenyl)phenol + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 2-methoxy-6-(all-trans-heptaprenyl)benzene-1,4-diol + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81283

2-methoxy-6-(all-trans-octaprenyl)phenol + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 2-methoxy-6-(all-trans-octaprenyl)benzene-1,4-diol + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81287

2-methoxy-6-(all-trans-nonaprenyl)phenol + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 2-methoxy-6-(all-trans-nonaprenyl)benzene-1,4-diol + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81291

2-methoxy-6-(all-trans-decaprenyl)phenol + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H(+) = 2-methoxy-6-(all-trans-decaprenyl)benzene-1,4-diol + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O

Direction not assertedBalance undeterminableRhea 81295

dihydroprecondylocarpine acetate = dihydroprecondylocarpine acetate (enamine form)

Direction not assertedBalancedRhea 81299

dihydroprecondylocarpine acetate (enamine form) = dehydrosecodine + acetate + H(+)

Direction not assertedBalancedRhea 81303

dehydrosecodine = (-)-tabersonine

Direction not assertedBalancedRhea 81307

dehydrosecodine = catharanthine

Direction not assertedBalancedRhea 81311

dehydrosecodine = (-)-16-carbomethoxycleaviminium

Direction not assertedBalancedRhea 81315

a ribonucleoside 3'-phosphate-2'-3'-cyclophospho-GMP + H2O = a ribonucleoside 3'-phosphate + 2',3'-cyclophospho-GMP + H(+)

Left to rightBalance undeterminableRhea 81319

a guanylyl-uridine-RNA = a 3'-end 2',3'-cyclophospho-GMP-RNA + a 5'-end dephospho-uridine-RNA

Left to rightBalance undeterminableRhea 81323

(-)-16-carbomethoxycleaviminium + NADPH + H(+) = (-)-coronaridine + NADP(+)

Direction not assertedBalancedRhea 81327

11-hydroxystrychnine + S-adenosyl-L-methionine = alpha-colubrine + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 81331

UDP-alpha-D-galactofuranose(out) + UMP(in) = UDP-alpha-D-galactofuranose(in) + UMP(out)

Direction not assertedBalancedTransportRhea 81335

a flavonol 3-O-beta-D-glucoside + H2O = a flavonol + D-glucose

Direction not assertedBalance undeterminableRhea 81339

(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + D-serine + H2O = alpha-(hydroxymethyl)serine + (6S)-5,6,7,8-tetrahydrofolate

Direction not assertedBalancedRhea 81343

arsenite(in) = arsenite(out)

Direction not assertedBalancedTransportRhea 81347

3-hydroxybutanoate(in) = 3-hydroxybutanoate(out)

Direction not assertedBalancedTransportRhea 81351

D-mannitol(in) = D-mannitol(out)

Direction not assertedBalancedTransportRhea 81355

D-sorbitol(in) = D-sorbitol(out)

Direction not assertedBalancedTransportRhea 81359

a beta-D-galactofuranoside + UDP-alpha-D-galactofuranose = a beta-D-Galf-(1->5)-beta-D-galactofuranoside + UDP + H(+)

Direction not assertedBalance undeterminableRhea 81363

4'-phosphooxetanocin A + H2O = oxetanocin A + phosphate

Direction not assertedBalancedRhea 81367

(2S,4R)-bornyl diphosphate + H2O = (1R,2S,4R)-borneol + diphosphate

Direction not assertedBalancedRhea 81371

a 5'-end 5'-dephospho-ribonucleotidyl-ribonucleotide-RNA + H2O = a ribonucleoside 3'-phosphate + a 5'-end dephospho-ribonucleoside-RNA + H(+)

Left to rightBalance undeterminableRhea 81375

a 5'-end 5'-dephospho-2'-deoxyribonucleotidyl-2'-deoxyribonucleotide in single-stranded DNA + H2O = a 5'-end dephospho-2'-deoxyribonucleoside in single-stranded DNA + a 2'-deoxyribonucleoside 3'-phosphate + H(+)

Left to rightBalance undeterminableRhea 81379

an adenylyl-uridine-RNA = a 3'-end 2',3'-cyclophospho-AMP-RNA + a 5'-end dephospho-uridine-RNA

Left to rightBalance undeterminableRhea 81383

N(6)-[(S)-lactoyl]-L-lysyl-[protein] + H2O = (S)-lactate + L-lysyl-[protein]

Left to rightBalance undeterminableRhea 81387

2-nitrobutanedioate + H(+) = 3-nitropropanoate + CO2

Direction not assertedBalancedRhea 81391

strictosidine aglycone = cathenamine + H2O + H(+)

Direction not assertedBalancedRhea 81395

3-nitropropanoate + A + H2O = 3-oxopropanoate + nitrite + AH2 + H(+)

Direction not assertedBalancedRhea 81399

vomilenine = perakine

Direction not assertedBalancedRhea 81403

dAMP + S-adenosyl-L-methionine = 4'-phospho-dehydrooxetanocin + 5'-deoxyadenosine + L-methionine + H(+)

Direction not assertedBalancedRhea 81407

AH2 + 2 S-adenosyl-L-methionine = 2 5'-deoxyadenosin-5'-yl radical + 2 L-methionine + A + 2 H(+)

Direction not assertedBalancedRhea 81411

2 5'-deoxyadenosin-5'-yl radical + 2 dAMP + A = 2 4'-phospho-dehydrooxetanocin + 2 5'-deoxyadenosine + AH2

Direction not assertedBalancedRhea 81415

(3R)-3-hydroxy-4-oxobutanoate + NAD(+) + H2O = (R)-malate + NADH + 2 H(+)

Direction not assertedBalancedRhea 81419

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