Skip to content

Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

Atlas Graph Twin Access

Search the graph

Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

Loading the page.

Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

The graph

Compounds
Outcomes
Proteins
Atlas
Interactions
Papers
Articles
Graph
Search

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases
Reactions
Reach

How it works

Mission
Method
Twin
How to read the evidence
Sources and licences

Build on it

Access
In your assistant
For agents
Query the graph
Bulk export

A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSourceClear

Reactions

14,351–14,400 of 18,558 reactions from Rhea

(E)-non-2-enal + NAD(+) + H2O = (E)-non-2-enoate + NADH + 2 H(+)
Left to rightBalancedRhea 69767
a short-chain fatty aldehyde + NAD(+) + H2O = a short-chain fatty acid + NADH + 2 H(+)
Direction not assertedBalance undeterminableRhea 69771
(2E,6E)-farnesyl diphosphate = beta-ylangene + diphosphate
Direction not assertedBalancedRhea 69775
2-oxindole-3-acetate + succinyl-CoA = (2-oxoindol-3-yl)acetyl-CoA + succinate
Direction not assertedBalancedRhea 69779
(2-aminophenyl)succinate + succinyl-CoA = 2-(2-aminophenyl)succinyl-CoA + succinate
Direction not assertedBalancedRhea 69783
(2-aminophenyl)succinate + succinyl-CoA = 3-(2-aminophenyl)succinyl-CoA + succinate
Direction not assertedBalancedRhea 69787
D-phenylalanyl-tRNA(Phe) + H2O = D-phenylalanine + tRNA(Phe) + H(+)

Direction not assertedBalancedRhea 69791

D-aspartyl-tRNA(Asp) + H2O = tRNA(Asp) + D-aspartate + H(+)

Direction not assertedBalancedRhea 69795

D-tryptophanyl-tRNA(Trp) + H2O = tRNA(Trp) + D-tryptophan

Direction not assertedBalancedRhea 69799

benzoate + ATP + H(+) = benzoyl-AMP + diphosphate

Direction not assertedBalancedRhea 69803

benzoyl-AMP + CoA = benzoyl-CoA + AMP + H(+)

Direction not assertedBalancedRhea 69807

6-deoxycathasterone + reduced [NADPH--hemoprotein reductase] + O2 = 6-deoxoteasterone + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69811

cathasterone + reduced [NADPH--hemoprotein reductase] + O2 = teasterone + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69815

hypotaurine + NADPH + O2 + H(+) = taurine + NADP(+) + H2O

Left to rightBalancedRhea 69819

(22S)-22-hydroxycampest-4-en-3-one + reduced [NADPH--hemoprotein reductase] + O2 = (22R,23R)-22,23-dihydroxycampest-4-en-3-one + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69823

(22S)-22-hydroxycampesterol + reduced [NADPH--hemoprotein reductase] + O2 = (22R,23R)-22,23-dihydroxycampesterol + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69827

campestanol + reduced [NADPH--hemoprotein reductase] + O2 = 6-deoxycathasterone + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69831

campesterol + reduced [NADPH--hemoprotein reductase] + O2 = (22S)-22-hydroxycampesterol + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69835

cholesterol + reduced [NADPH--hemoprotein reductase] + O2 = (22S)-22-hydroxycholesterol + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69839

a 5,6-dihydrouridine in RNA + NAD(+) = a uridine in RNA + NADH + H(+)

Direction not assertedBalance undeterminableRhea 69843

a 5,6-dihydrouridine in RNA + NADP(+) = a uridine in RNA + NADPH + H(+)

Direction not assertedBalance undeterminableRhea 69847

a 5,6-dihydrouridine in mRNA + NAD(+) = a uridine in mRNA + NADH + H(+)

Right to leftBalance undeterminableRhea 69851

a 5,6-dihydrouridine in mRNA + NADP(+) = a uridine in mRNA + NADPH + H(+)

Right to leftBalance undeterminableRhea 69855

a uridine in 12S rRNA + S-adenosyl-L-methionine = a 5-methyluridine in 12S rRNA + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 69859

a uridine in mRNA + S-adenosyl-L-methionine = a 5-methyluridine in mRNA + S-adenosyl-L-homocysteine + H(+)

Left to rightBalance undeterminableRhea 69863

a uridine in RNA + S-adenosyl-L-methionine = a 5-methyluridine in RNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 69867

cholestanol + reduced [NADPH--hemoprotein reductase] + O2 = (22S)-22-hydroxycholestanol + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69871

6-deoxocastasterone + reduced [NADPH--hemoprotein reductase] + O2 = 6alpha-hydroxycastasterone + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69875

6alpha-hydroxycastasterone + reduced [NADPH--hemoprotein reductase] + O2 = castasterone + oxidized [NADPH--hemoprotein reductase] + 2 H2O + H(+)

Direction not assertedBalance undeterminableRhea 69879

L-ascorbate(out) + 2 Na(+)(out) = L-ascorbate(in) + 2 Na(+)(in)

Left to rightBalancedTransportRhea 69883

uridine(out) + Na(+)(out) = uridine(in) + Na(+)(in)

Direction not assertedBalancedTransportRhea 69887

thymidine(out) + Na(+)(out) = thymidine(in) + Na(+)(in)

Direction not assertedBalancedTransportRhea 69891

cytidine(out) + Na(+)(out) = cytidine(in) + Na(+)(in)

Direction not assertedBalancedTransportRhea 69895

thymidine(out) + 2 Na(+)(out) = thymidine(in) + 2 Na(+)(in)

Direction not assertedBalancedTransportRhea 69899

cytidine(out) + 2 Na(+)(out) = cytidine(in) + 2 Na(+)(in)

Direction not assertedBalancedTransportRhea 69903

uridine(out) + 2 Na(+)(out) = uridine(in) + 2 Na(+)(in)

Direction not assertedBalancedTransportRhea 69907

adenosine(out) + 2 Na(+)(out) = adenosine(in) + 2 Na(+)(in)

Direction not assertedBalancedTransportRhea 69911

guanosine(out) + 2 Na(+)(out) = guanosine(in) + 2 Na(+)(in)

Direction not assertedBalancedTransportRhea 69915

inosine(out) + 2 Na(+)(out) = inosine(in) + 2 Na(+)(in)

Direction not assertedBalancedTransportRhea 69919

castasterone + reduced [NADPH--hemoprotein reductase] + O2 = brassinolide + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69923

adenosine(out) + Na(+)(out) = adenosine(in) + Na(+)(in)

Direction not assertedBalancedTransportRhea 69927

inosine(out) + Na(+)(out) = inosine(in) + Na(+)(in)

Direction not assertedBalancedTransportRhea 69931

guanosine(out) + Na(+)(out) = guanosine(in) + Na(+)(in)

Direction not assertedBalancedTransportRhea 69935

6-deoxotyphasterol + reduced [NADPH--hemoprotein reductase] + O2 = 6alpha-hydroxytyphasterol + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69939

6alpha-hydroxytyphasterol + reduced [NADPH--hemoprotein reductase] + O2 = typhasterol + oxidized [NADPH--hemoprotein reductase] + 2 H2O + H(+)

Direction not assertedBalance undeterminableRhea 69943

3-dehydro-6-deoxoteasterone + reduced [NADPH--hemoprotein reductase] + O2 = 3-dehydro-6alpha-hydroxyteasterone + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69947

3-dehydro-6alpha-hydroxyteasterone + reduced [NADPH--hemoprotein reductase] + O2 = 3-dehydroteasterone + oxidized [NADPH--hemoprotein reductase] + 2 H2O + H(+)

Direction not assertedBalance undeterminableRhea 69951

Ca(2+)(in) + 3 Na(+)(out) = Ca(2+)(out) + 3 Na(+)(in)

Direction not assertedBalancedTransportRhea 69955

6-deoxoteasterone + reduced [NADPH--hemoprotein reductase] + O2 = 6alpha-hydroxyteasterone + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 69959

6alpha-hydroxytyphasterol + reduced [NADPH--hemoprotein reductase] + O2 = teasterone + oxidized [NADPH--hemoprotein reductase] + 2 H2O + H(+)

Direction not assertedBalance undeterminableRhea 69963

Page 288 of 372