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ReactionsRhea and Human-GEM, by subsystem
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Reference

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Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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A reference for what the literature reports. Not medical advice.

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Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSourceClear

Reactions

7,651–7,700 of 18,558 reactions from Rhea

2,3-di-(9Z)-octadecenoyl-sn-glycerol + H2O = 3-(9Z-octadecenoyl)-sn-glycerol + (9Z)-octadecenoate + H(+)
Left to rightBalancedRhea 42604
a plastoquinone + NADH + (n+1) H(+)(in) = a plastoquinol + NAD(+) + n H(+)(out)
Direction not assertedBalance undeterminableRhea 42608
a plastoquinone + NADPH + (n+1) H(+)(in) = a plastoquinol + NADP(+) + n H(+)(out)
Direction not assertedBalance undeterminableRhea 42612
(Z)-2-methylureidoacrylate + H2O + H(+) = (Z)-2-methylaminoacrylate + NH4(+) + CO2
Direction not assertedBalancedRhea 42620
(Z)-3-ureidoacrylate + H2O + H(+) = (Z)-3-aminoacrylate + NH4(+) + CO2
Direction not assertedBalancedRhea 42624
uridine(747) in 23S rRNA + S-adenosyl-L-methionine = 5-methyluridine(747) in 23S rRNA + S-adenosyl-L-homocysteine + H(+)
Direction not assertedBalancedRhea 42628

adenosine(2503) in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 8-methyladenosine(2503) in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine

Direction not assertedBalance undeterminableRhea 42632

Mo-molybdopterin + L-cysteine + AH2 = thio-Mo-molybdopterin + L-alanine + A + H2O

Direction not assertedBalancedRhea 42636

a 2-demethylmenaquinol + S-adenosyl-L-methionine = a menaquinol + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 42640

apo-[malonate decarboxylase ACP] + 2'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoA = holo-[malonate decarboxylase ACP] + diphosphate

Direction not assertedBalance undeterminableRhea 42644

(2,5-ethylene furandicarboxylate)(n) + 2 H2O = (2,5-ethylene furandicarboxylate)(n-1) + 2,5-dicarboxyfuran + ethylene glycol + 2 H(+)

Direction not assertedBalance undeterminableRhea 42648

2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 4 S-adenosyl-L-methionine = diphthine methyl ester-[translation elongation factor 2] + 4 S-adenosyl-L-homocysteine + 3 H(+)

Direction not assertedBalance undeterminableRhea 42652

diphthine methyl ester-[translation elongation factor 2] + H2O = diphthine-[translation elongation factor 2] + methanol + H(+)

Direction not assertedBalance undeterminableRhea 42656

UDP-N-acetyl-alpha-D-glucosamine + NAD(+) = UDP-2-acetamido-3-dehydro-2-deoxy-alpha-D-glucopyranose + NADH + H(+)

Direction not assertedBalancedRhea 42660

alpha-L-arabinopyanose + NADP(+) = L-arabinono-1,4-lactone + NADPH + H(+)

Direction not assertedBalancedRhea 42664

L-rhamnofuranose + NADP(+) = L-rhamnono-1,4-lactone + NADPH + H(+)

Direction not assertedBalancedRhea 42668

gamma-L-glutamyl-L-cysteine + hercynine + O2 = gamma-L-glutamyl-hercynylcysteine S-oxide + H2O

Direction not assertedBalancedRhea 42672

L-histidine + L-cysteine + O2 = L-alanin-3-yl L-histidin-5-yl sulfoxide + H2O

Direction not assertedBalancedRhea 42676

gamma-L-glutamyl-hercynylcysteine S-oxide + H2O = S-(hercyn-2-yl)-L-cysteine S-oxide + L-glutamate

Direction not assertedBalancedRhea 42684

S-(hercyn-2-yl)-L-cysteine S-oxide + AH2 + H(+) = ergothioneine + pyruvate + A + NH4(+)

Direction not assertedBalancedRhea 42688

alpha-maltose 1-phosphate + [(1->4)-alpha-D-glucosyl](n) = [(1->4)-alpha-D-glucosyl](n+2) + phosphate

Direction not assertedBalance undeterminableRhea 42692

6-carboxyhexanoyl-[ACP] methyl ester + H2O = 6-carboxyhexanoyl-[ACP] + methanol + H(+)

Direction not assertedBalance undeterminableRhea 42700

hercynine + L-cysteine + O2 = S-(hercyn-2-yl)-L-cysteine S-oxide + H2O

Direction not assertedBalancedRhea 42704

guanosine(46) in tRNA + S-adenosyl-L-methionine = N(7)-methylguanosine(46) in tRNA + S-adenosyl-L-homocysteine

Direction not assertedBalancedRhea 42708

uridine(54) in tRNA + S-adenosyl-L-methionine = 5-methyluridine(54) in tRNA + S-adenosyl-L-homocysteine + H(+)

Left to rightBalancedRhea 42712

5-methylaminomethyl-2-thiouridine(34) in tRNA + selenophosphate + (2E)-geranyl diphosphate + H2O + H(+) = 5-methylaminomethyl-2-selenouridine(34) in tRNA + (2E)-thiogeraniol + phosphate + diphosphate

Direction not assertedBalancedRhea 42716

uridine(2552) in 23S rRNA + S-adenosyl-L-methionine = 2'-O-methyluridine(2552) in 23S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42720

guanosine(2922) in 27S pre-rRNA + S-adenosyl-L-methionine = 2'-O-methylguanosine(2922) in 27S pre-rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42724

uridine(2791) in 21S rRNA + S-adenosyl-L-methionine = 2'-O-methyluridine(2791) in 21S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42728

guanosine(527) in 16S rRNA + S-adenosyl-L-methionine = N(7)-methylguanosine(527) in 16S rRNA + S-adenosyl-L-homocysteine

Direction not assertedBalancedRhea 42732

guanosine(1207) in 16S rRNA + S-adenosyl-L-methionine = N(2)-methylguanosine(1207) in 16S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42736

guanosine(2445) in 23S rRNA + S-adenosyl-L-methionine = N(2)-methylguanosine(2445) in 23S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42740

guanosine(1835) in 23S rRNA + S-adenosyl-L-methionine = N(2)-methylguanosine(1835) in 23S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42744

cytidine(967) in 16S rRNA + S-adenosyl-L-methionine = 5-methylcytidine(967) in 16S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42748

pseudouridine(1915) in 23S rRNA + S-adenosyl-L-methionine = N(3)-methylpseudouridine(1915) in 23S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42752

cytidine(1407) in 16S rRNA + S-adenosyl-L-methionine = 5-methylcytidine(1407) in 16S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42756

D-glyceraldehyde 3-phosphate + NAD(+) + H2O = (2R)-3-phosphoglycerate + NADH + 2 H(+)

Direction not assertedBalancedRhea 42760

oxidized coenzyme F420-(gamma-L-Glu)(n) + formate + 2 H(+) = reduced coenzyme F420-(gamma-L-Glu)(n) + CO2

Direction not assertedBalance undeterminableRhea 42764

a (2S)-2-hydroxycarboxylate + NADP(+) = a 2-oxocarboxylate + NADPH + H(+)

Direction not assertedBalance undeterminableRhea 42768

guanosine(1405) in 16S rRNA + S-adenosyl-L-methionine = N(7)-methylguanosine(1405) in 16S rRNA + S-adenosyl-L-homocysteine

Direction not assertedBalancedRhea 42772

adenosine(1408) in 16S rRNA + S-adenosyl-L-methionine = N(1)-methyladenosine(1408) in 16S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42776

adenosine(1779)/adenosine(1780) in 18S rRNA + 4 S-adenosyl-L-methionine = N(6)-dimethyladenosine(1779)/N(6)-dimethyladenosine(1780) in 18S rRNA + 4 S-adenosyl-L-homocysteine + 4 H(+)

Direction not assertedUnbalancedRhea 42780

adenosine(2085) in 23S rRNA + 2 S-adenosyl-L-methionine = N(6)-dimethyladenosine(2085) in 23S rRNA + 2 S-adenosyl-L-homocysteine + 2 H(+)

Direction not assertedBalancedRhea 42784

cytidine(2498) in 23S rRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(2498) in 23S rRNA + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 42788

cholesterol + hexadecanoyl-CoA = cholesteryl hexadecanoate + CoA

Left to rightBalancedRhea 42792

(9Z,12Z)-octadecadienoyl-CoA + cholesterol = cholesteryl (9Z,12Z)-octadecadienoate + CoA

Left to rightBalancedRhea 42796

15-cis-4,4'-diapophytoene + 3 FAD + 3 H(+) = all-trans-4,4'-diaponeurosporene + 3 FADH2

Direction not assertedBalancedRhea 42800

5,6,7,8-tetrahydromethanopterin + A = 7,8-dihydromethanopterin + AH2

Direction not assertedBalancedRhea 42804

3 oxidized coenzyme F420-(gamma-L-Glu)(n) + hydrogen sulfide + 3 H2O + 2 H(+) = 3 reduced coenzyme F420-(gamma-L-Glu)(n) + sulfite

Direction not assertedBalance undeterminableRhea 42808

octadecanoyl-CoA + cholesterol = cholesteryl octadecanoate + CoA

Left to rightBalancedRhea 42812

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