Skip to content

Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

Atlas Graph Twin Access

Search the graph

Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

Loading the page.

Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

The graph

Compounds
Outcomes
Proteins
Atlas
Interactions
Papers
Articles
Graph
Search

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases
Reactions
Reach

How it works

Mission
Method
Twin
How to read the evidence
Sources and licences

Build on it

Access
In your assistant
For agents
Query the graph
Bulk export

A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSourceClear

Reactions

6,451–6,500 of 18,558 reactions from Rhea

a 1-acyl-sn-glycero-3-phospho-L-serine + (9Z)-octadecenoyl-CoA = 1-acyl-2-(9Z-octadecenoyl)-sn-glycero-3-phospho-L-serine + CoA
Direction not assertedBalance undeterminableRhea 37735
a 1-acyl-sn-glycero-3-phospho-L-serine + (9Z)-hexadecenoyl-CoA = 1-acyl-2-(9Z)-hexadecenoyl-sn-glycero-3-phosphoserine + CoA
Direction not assertedBalance undeterminableRhea 37739
dimethylallyl phosphate + FMNH2 = prenylated FMNH2 + phosphate
Direction not assertedBalancedRhea 37743
1-O-octadecyl-sn-glycero-3-phosphocholine + (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA = 1-O-octadecyl-2-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-sn-glycero-3-phosphocholine + CoA
Left to rightBalancedRhea 37747
2-methyl-trans-aconitate = 2-methyl-cis-aconitate
Direction not assertedBalancedRhea 37751
a 1-O-(1Z-alkenyl)-sn-glycero-3-phosphoethanolamine + hexadecanoyl-CoA = 1-O-(1Z)-alkenyl-2-hexadecanoyl-sn-glycero-3-phosphoethanolamine + CoA
Left to right

Balance undeterminable

Rhea 37755

a 1-O-(1Z-alkenyl)-sn-glycero-3-phosphoethanolamine + octadecanoyl-CoA = 1-O-(1Z)-alkenyl-2-octadecanoyl-sn-glycero-3-phosphoethanolamine + CoA

Left to rightBalance undeterminableRhea 37759

a 1-O-(1Z-alkenyl)-sn-glycero-3-phosphoethanolamine + octanoyl-CoA = 1-O-(1Z)-alkenyl-2-octanoyl-sn-glycero-3-phosphoethanolamine + CoA

Left to rightBalance undeterminableRhea 37763

a 1-acyl-sn-glycero-3-phosphoethanolamine + hexadecanoyl-CoA = 1-acyl-2-hexadecanoyl-sn-glycero-3-phosphoethanolamine + CoA

Left to rightBalance undeterminableRhea 37767

a 1-acyl-sn-glycero-3-phosphoethanolamine + octadecanoyl-CoA = 1-acyl-2-octadecanoyl-sn-glycero-3-phosphoethanolamine + CoA

Left to rightBalance undeterminableRhea 37771

octanoyl-CoA + a 1-acyl-sn-glycero-3-phosphoethanolamine = 1-acyl-2-octanoyl-sn-glycero-3-phosphoethanolamine + CoA

Left to rightBalance undeterminableRhea 37775

1-octadecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol) + (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA = 1-octadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) + CoA

Left to rightBalancedRhea 37779

1-O-hexadecyl-sn-glycero-3-phosphocholine + (9Z)-octadecenoyl-CoA = 1-O-hexadecyl-2-(9Z)-octadecenoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37783

1-O-hexadecyl-sn-glycero-3-phosphocholine + (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA = 1-O-hexadecyl-2-(5Z,8Z,11Z,14Z)-eicosatetraenoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37787

aclacinomycin A + O2 = aclacinomycin Y + H2O2

Direction not assertedBalancedRhea 37791

2 NADPH + O2 + 2 H(+) = 2 NADP(+) + 2 H2O

Direction not assertedBalancedRhea 37795

2 NADH + O2 + 2 H(+) = 2 NAD(+) + 2 H2O

Direction not assertedBalancedRhea 37799

a 1-acyl-sn-glycero-3-phosphocholine + hexadecanoyl-CoA = 1-acyl-2-hexadecanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalance undeterminableRhea 37803

1-acyl-sn-glycero-3-phospho-(1'-sn-glycerol) + hexadecanoyl-CoA = 1-acyl-2-hexadecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol) + CoA

Left to rightBalance undeterminableRhea 37807

1-O-hexadecyl-sn-glycero-3-phosphocholine + hexadecanoyl-CoA = 1-O-hexadecyl-2-hexadecanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37811

(R)-2-(4-chloro-2-methylphenoxy)propanoate + 2-oxoglutarate + O2 = 2-methyl-4-chlorophenol + pyruvate + succinate + CO2

Direction not assertedBalancedRhea 37815

a 1-O-(1Z-alkenyl)-sn-glycero-3-phosphocholine + hexadecanoyl-CoA = 1-O-(1Z)-alkenyl-2-hexadecanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalance undeterminableRhea 37819

(R)-(2,4-dichlorophenoxy)propanoate + 2-oxoglutarate + O2 = 2,4-dichlorophenol + pyruvate + succinate + CO2

Direction not assertedBalancedRhea 37823

(S)-(2,4-dichlorophenoxy)propanoate + 2-oxoglutarate + O2 = 2,4-dichlorophenol + pyruvate + succinate + CO2

Direction not assertedBalancedRhea 37827

(S)-2-(4-chloro-2-methylphenoxy)propanoate + 2-oxoglutarate + O2 = 2-methyl-4-chlorophenol + pyruvate + succinate + CO2

Direction not assertedBalancedRhea 37831

aklavinone + NADPH + O2 + H(+) = epsilon-rhodomycinone + NADP(+) + H2O

Direction not assertedBalancedRhea 37835

1-O-octadecyl-sn-glycero-3-phosphocholine + hexadecanoyl-CoA = 1-O-octadecyl-2-hexadecanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37839

1-eicosanoyl-sn-glycero-3-phosphocholine + hexadecanoyl-CoA = 1-eicosanoyl-2-hexadecanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37843

13-dihydrodaunorubicin + NADPH + O2 + H(+) = daunorubicin + NADP(+) + 2 H2O

Direction not assertedBalancedRhea 37847

13-deoxydaunorubicin + NADPH + O2 + H(+) = 13-dihydrodaunorubicin + NADP(+) + H2O

Direction not assertedBalancedRhea 37851

hexanoyl-CoA + 1-hexadecanoyl-sn-glycero-3-phosphocholine = 1-hexadecanoyl-2-hexanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37855

octanoyl-CoA + 1-hexadecanoyl-sn-glycero-3-phosphocholine = 1-hexadecanoyl-2-octanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37859

decanoyl-CoA + 1-hexadecanoyl-sn-glycero-3-phosphocholine = 1-hexadecanoyl-2-decanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37863

tetradecanoyl-CoA + 1-hexadecanoyl-sn-glycero-3-phosphocholine = 1-hexadecanoyl-2-tetradecanoyl-sn-glycero-3-phosphocholine + CoA

Left to rightBalancedRhea 37867

2-heptyl-4(1H)-quinolone + NADH + O2 + H(+) = 2-heptyl-3-hydroxy-4(1H)-quinolone + NAD(+) + H2O

Direction not assertedBalancedRhea 37871

aklanonate + S-adenosyl-L-methionine = methyl aklanonate + S-adenosyl-L-homocysteine

Direction not assertedBalancedRhea 37875

methyl aklanonate = aklaviketone

Direction not assertedBalancedRhea 37879

oxalate + acetyl-CoA = oxalyl-CoA + acetate

Direction not assertedBalancedRhea 37883

small RNA 3'-end nucleotide + S-adenosyl-L-methionine = small RNA 3'-end 2'-O-methylnucleotide + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalance undeterminableRhea 37887

aclacinomycin T + H2O = 15-demethylaclacinomycin T + methanol

Direction not assertedBalancedRhea 37891

protodioscin + H2O = 26-deglucoprotodioscin + D-glucose

Direction not assertedBalancedRhea 37895

7-[(3S)-3-amino-3-carboxypropyl]wyosine(37) in tRNA(Phe) + 2-oxoglutarate + O2 = 7-(2-hydroxy-3-amino-3-carboxypropyl)wyosine(37) in tRNA(Phe) + succinate + CO2

Left to rightBalance undeterminableRhea 37899

6-hydroxytryprostatin B + S-adenosyl-L-methionine = tryprostatin A + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 37903

(9Z)-octadecenoate + O2 = (8E,10S)-10-hydroperoxy-octadeca-8-enoate

Direction not assertedBalancedRhea 37907

2-(9Z-octadecenoyl)-glycerol + (9Z)-octadecenoyl-CoA = 1,2-di-(9Z-octadecenoyl)-sn-glycerol + CoA

Left to rightBalancedRhea 37911

1-(9Z-octadecenoyl)-glycerol + (9Z)-octadecenoyl-CoA = 1,2-di-(9Z-octadecenoyl)-glycerol + CoA

Left to rightBalancedRhea 37915

(9Z,12Z)-octadecadienoate + O2 = (8E,10S,12Z)-10-hydroperoxyoctadeca-8,12-dienoate

Direction not assertedBalancedRhea 37919

(9Z,12Z,15Z)-octadecatrienoate + O2 = (8E,10S,12Z,15Z)-10-hydroperoxyoctadeca-8,12,15-trienoate

Direction not assertedBalancedRhea 37923

(8S)-hydroperoxy-(5Z,9E,11Z,14Z)-eicosatetraenoate = 8-oxo-(5Z,9E,11Z,14Z)-eicosatetraenoate + H2O

Left to rightBalancedRhea 37927

(8S)-hydroperoxy-(5Z,9E,11Z,14Z)-eicosatetraenoate = (10R)-hydroxy-(8S,9S)-epoxy-(5Z,11Z,14Z)-eicosatrienoate

Left to rightBalancedRhea 37931

Page 130 of 372