Skip to content

Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

Atlas Graph Twin Access

Search the graph

Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

Loading the page.

Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

The graph

Compounds
Outcomes
Proteins
Atlas
Interactions
Papers
Articles
Graph
Search

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases
Reactions
Reach

How it works

Mission
Method
Twin
How to read the evidence
Sources and licences

Build on it

Access
In your assistant
For agents
Query the graph
Bulk export

A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Reactions

Reactions from Rhea and Human-GEM · Reach

reactions in the graph: 31,435

By source

Rhea18,558
Human-GEM12,877

Inferred

Reference data, not a finding. Evidence key

Filter reactions by equationSourceClear

Reactions

5,151–5,200 of 18,558 reactions from Rhea

limonene-1,2-diol + NAD(+) = 1-hydroxylimonen-2-one + NADH + H(+)
Direction not assertedBalancedRhea 32375
(1R,2R,4S)-limonene-1,2-diol + NAD(+) = (1R,4S)-1-hydroxylimonen-2-one + NADH + H(+)
Direction not assertedBalancedRhea 32379
(1S,2S,4R)-limonene-1,2-diol + NAD(+) = (1S,4R)-1-hydroxylimonen-2-one + NADH + H(+)
Direction not assertedBalancedRhea 32383
dihydrocarveol + NAD(+) = dihydrocarvone + NADH + H(+)
Direction not assertedBalancedRhea 32387
(1R,2R,4R)-dihydrocarveol + NAD(+) = (1R,4R)-dihydrocarvone + NADH + H(+)
Direction not assertedBalancedRhea 32391
(1S,2S,4S)-dihydrocarveol + NAD(+) = (1S,4S)-dihydrocarvone + NADH + H(+)
Direction not assertedBalancedRhea 32395
(1S,2R,4S)-neodihydrocarveol + NAD(+) = (1S,4S)-dihydrocarvone + NADH + H(+)

Direction not assertedBalancedRhea 32399

(1R,2S,4R)-neodihydrocarveol + NAD(+) = (1R,4R)-dihydrocarvone + NADH + H(+)

Direction not assertedBalancedRhea 32403

(1R,2S,4S)-neoisodihydrocarveol + NAD(+) = (1R,4S)-isodihydrocarvone + NADH + H(+)

Direction not assertedBalancedRhea 32407

(1R,2R,4S)-isodihydrocarveol + NAD(+) = (1R,4S)-isodihydrocarvone + NADH + H(+)

Direction not assertedBalancedRhea 32411

(1S,2S,4R)-isodihydrocarveol + NAD(+) = (1S,4R)-isodihydrocarvone + NADH + H(+)

Direction not assertedBalancedRhea 32415

(1S,2R,4R)-neoisodihydrocarveol + NAD(+) = (1S,4R)-isodihydrocarvone + NADH + H(+)

Direction not assertedBalancedRhea 32419

(1R,4R)-dihydrocarvone + A = (R)-carvone + AH2

Direction not assertedBalancedRhea 32423

(1R,4S)-isodihydrocarvone + A = (S)-carvone + AH2

Direction not assertedBalancedRhea 32427

(1R,4S)-menthone + NADPH + O2 + H(+) = (4R,7S)-7-isopropyl-4-methyloxepan-2-one + NADP(+) + H2O

Direction not assertedBalancedRhea 32431

dihydrocarvone + NADPH + O2 + H(+) = 4-isopropenyl-7-methyloxepan-2-one + NADP(+) + H2O

Direction not assertedBalancedRhea 32435

(+)-epi-isozizaene + 4 reduced [2Fe-2S]-[ferredoxin] + 2 O2 + 4 H(+) = albaflavenone + 4 oxidized [2Fe-2S]-[ferredoxin] + 3 H2O

Direction not assertedBalance undeterminableRhea 32439

all-trans-zeaxanthin + 4 reduced [2Fe-2S]-[ferredoxin] + 2 O2 + 4 H(+) = all-trans-violaxanthin + 4 oxidized [2Fe-2S]-[ferredoxin] + 2 H2O

Direction not assertedBalance undeterminableRhea 32443

(-)-vetispiradiene + 2 reduced [NADPH--hemoprotein reductase] + 2 O2 = solavetivone + 2 oxidized [NADPH--hemoprotein reductase] + 3 H2O + 2 H(+)

Direction not assertedBalance undeterminableRhea 32455

uroporphyrinogen III + 2 S-adenosyl-L-methionine = precorrin-2 + 2 S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 32459

glycine + 2 S-adenosyl-L-methionine = N,N-dimethylglycine + 2 S-adenosyl-L-homocysteine + 2 H(+)

Direction not assertedBalancedRhea 32463

sarcosine + 2 S-adenosyl-L-methionine = glycine betaine + 2 S-adenosyl-L-homocysteine + 2 H(+)

Direction not assertedBalancedRhea 32467

demethylsuberosin + reduced [NADPH--hemoprotein reductase] + O2 = (7S)-marmesin + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 32471

glycine + 3 S-adenosyl-L-methionine = glycine betaine + 3 S-adenosyl-L-homocysteine + 3 H(+)

Direction not assertedBalancedRhea 32475

2 iodide + L-tyrosine + 2 NADP(+) = 3,5-diiodo-L-tyrosine + 2 NADPH + H(+)

Right to leftBalancedRhea 32479

pheophorbide a + H2O + H(+) = pyropheophorbide a + methanol + CO2

Direction not assertedBalancedRhea 32483

CDP-choline + H2O = phosphocholine + CMP + 2 H(+)

Direction not assertedBalancedRhea 32487

alpha-humulene + reduced [NADPH--hemoprotein reductase] + O2 = 10-hydroxy-alpha-humulene + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 32491

(2E)-geraniol + reduced [NADPH--hemoprotein reductase] + O2 = (6E)-8-hydroxygeraniol + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 32495

(1R,5R)-sabinene + NADPH + O2 + H(+) = (1S,3R,5S)-sabinol + NADP(+) + H2O

Direction not assertedBalancedRhea 32499

linalool + reduced [NADPH--hemoprotein reductase] + O2 = (6E)-8-hydroxylinalool + oxidized [NADPH--hemoprotein reductase] + H2O + H(+)

Direction not assertedBalance undeterminableRhea 32503

4-isopropenyl-7-methyloxepan-2-one + H2O = 6-hydroxy-3-isopropenylheptanoate + H(+)

Direction not assertedBalancedRhea 32507

(4R,7R)-4-isopropenyl-7-methyloxepan-2-one + H2O = (3R,6R)-6-hydroxy-3-isopropenylheptanoate + H(+)

Direction not assertedBalancedRhea 32511

(4S,7R)-4-isopropenyl-7-methyloxepan-2-one + H2O = (3S,6R)-6-hydroxy-3-isopropenylheptanoate + H(+)

Direction not assertedBalancedRhea 32515

(2E)-geranyl diphosphate + S-adenosyl-L-methionine = (E)-2-methylgeranyl diphosphate + S-adenosyl-L-homocysteine + H(+)

Direction not assertedBalancedRhea 32519

nigerose + phosphate = beta-D-glucose 1-phosphate + D-glucose

Direction not assertedBalancedRhea 32523

N,N'-diacetylchitobiose + phosphate = N-acetyl-alpha-D-glucosamine 1-phosphate + N-acetyl-D-glucosamine

Direction not assertedBalancedRhea 32527

beta-D-mannosyl-(1->4)-D-glucose + phosphate = alpha-D-mannose 1-phosphate + D-glucose

Direction not assertedBalancedRhea 32531

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate + H2O = 4-hydroxy-2-oxohexanoate

Direction not assertedBalancedRhea 32535

(2E)-geranyl diphosphate = (+)-car-3-ene + diphosphate

Direction not assertedBalancedRhea 32539

(2E)-geranyl diphosphate + H2O = 1,8-cineole + diphosphate

Direction not assertedBalancedRhea 32543

(2E)-geranyl diphosphate = (1R,5R)-sabinene + diphosphate

Direction not assertedBalancedRhea 32547

(2E)-geranyl diphosphate + H2O = (S)-alpha-terpineol + diphosphate

Direction not assertedBalancedRhea 32551

(2E)-geranyl diphosphate + H2O = (R)-alpha-terpineol + diphosphate

Direction not assertedBalancedRhea 32555

(2E)-geranyl diphosphate = gamma-terpinene + diphosphate

Direction not assertedBalancedRhea 32559

(2E)-geranyl diphosphate = alpha-terpinene + diphosphate

Direction not assertedBalancedRhea 32563

(2E)-geranyl diphosphate = (1R,4S)-camphene + diphosphate

Direction not assertedBalancedRhea 32567

(E)-2-methylgeranyl diphosphate + H2O = 2-methylisoborneol + diphosphate

Direction not assertedBalancedRhea 32571

(2E)-geranyl diphosphate = (1R,5R)-alpha-pinene + diphosphate

Direction not assertedBalancedRhea 32575

(2E)-geranyl diphosphate = (1R,5R)-beta-pinene + diphosphate

Direction not assertedBalancedRhea 32579

Page 104 of 372