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Catalyst

Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

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Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

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Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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Outcomes
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Articles
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Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases
Reactions
Reach

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A reference for what the literature reports. Not medical advice.

Reaction

1)-Cer(d18:1(4E))+3'-phospho-5'-adenylyl sulfateMAM02334c+adenosine 3',5'-bismonophosphate

Reversible · Balance undeterminable · EC 2.8.2.11

Compartment: cytosol

Inferred

Reference data, not a finding. Evidence key

Catalysts

GAL3ST1

Human-GEM MAR00928·2.0.1·CC BY 4.0Reference data

a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E))+3'-phospho-5'-adenylyl sulfate⇌MAM02334c+adenosine 3',5'-bismonophosphate

Catalysts

a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E))+3'-phospho-5'-adenylyl sulfateMAM02334c+adenosine 3',5'-bismonophosphate