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Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

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Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

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Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

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A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Organisms

Names from NCBI Taxonomy

organisms in the graph: 201

Filter organisms by name

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101–200 of 201, alphabetically

Lacticaseibacillus rhamnosus GGNCBI TaxonomyNCBITaxon:568703Lacticaseibacillus rhamnosus GG, a probiotic bacterial strain formerly named Lactobacillus rhamnosus GG. Probiotic effects are specific to the strain, so the findings here apply to GG and not to other L. rhamnosus strains.
Lactiplantibacillus plantarumNCBI TaxonomyNCBITaxon:1590
Lactobacillus acidophilusNCBI TaxonomyNCBITaxon:1579
Lactobacillus gasseriNCBI TaxonomyNCBITaxon:1596
Lactobacillus helveticusNCBI TaxonomyNCBITaxon:1587

More of the reference layer

Pathways
Biological processes
Anatomy
Cell types
Materials
Regulatory assessments
Diseases

Evidence: Compounds · Outcomes · Papers · Search

Lactococcus lactis

NCBI TaxonomyNCBITaxon:1358

Lagerstroemia speciosaNCBI TaxonomyNCBITaxon:122810

Lavandula angustifoliaNCBI TaxonomyNCBITaxon:39329

Lentinula edodesNCBI TaxonomyNCBITaxon:5353

Leonurus cardiacaNCBI TaxonomyNCBITaxon:587664

Lepidium meyeniiNCBI TaxonomyNCBITaxon:153348Maca, an Andean root vegetable. Root colour and preparation vary between studies and are recorded with each finding.

Limnospira platensisNCBI TaxonomyNCBITaxon:118562

Limosilactobacillus reuteriNCBI TaxonomyNCBITaxon:1598

Linum usitatissimumNCBI TaxonomyNCBITaxon:4006

Lycium barbarumNCBI TaxonomyNCBITaxon:112863

Magnolia officinalisNCBI TaxonomyNCBITaxon:85864

Malus domesticaNCBI TaxonomyNCBITaxon:3750

Matricaria chamomillaNCBI TaxonomyNCBITaxon:98504

Medicago sativaNCBI TaxonomyNCBITaxon:3879

Melissa officinalisNCBI TaxonomyNCBITaxon:39338

Mentha x piperitaNCBI TaxonomyNCBITaxon:34256

Momordica charantiaNCBI TaxonomyNCBITaxon:3673

Morinda citrifoliaNCBI TaxonomyNCBITaxon:43522

Moringa oleiferaNCBI TaxonomyNCBITaxon:3735Moringa, a tree whose leaves and seeds are eaten and taken as supplements. Leaf and seed preparations differ, and each finding records which was used.

Morus albaNCBI TaxonomyNCBITaxon:3498

Mucuna pruriensNCBI TaxonomyNCBITaxon:157652

Myrciaria dubiaNCBI TaxonomyNCBITaxon:468946

Nasturtium officinaleNCBI TaxonomyNCBITaxon:65948

Nigella sativaNCBI TaxonomyNCBITaxon:555479

Ocimum tenuiflorumNCBI TaxonomyNCBITaxon:204149

Olea europaeaNCBI TaxonomyNCBITaxon:4146

Origanum vulgareNCBI TaxonomyNCBITaxon:39352

Panax ginsengNCBI TaxonomyNCBITaxon:4054Asian ginseng. A different species from American ginseng (Panax quinquefolius), and the two are not interchangeable.

Panax quinquefoliusNCBI TaxonomyNCBITaxon:44588

Passiflora incarnataNCBI TaxonomyNCBITaxon:159425

Paullinia cupanaNCBI TaxonomyNCBITaxon:392747

Petasites hybridusNCBI TaxonomyNCBITaxon:278673

Petroselinum crispumNCBI TaxonomyNCBITaxon:4043

Phaseolus vulgarisNCBI TaxonomyNCBITaxon:3885

Pinus pinasterNCBI TaxonomyNCBITaxon:71647

Piper methysticumNCBI TaxonomyNCBITaxon:130404

Piper nigrumNCBI TaxonomyNCBITaxon:13216

Plantago ovataNCBI TaxonomyNCBITaxon:185002

Plectranthus barbatusNCBI TaxonomyNCBITaxon:41228

Pleuropterus multiflorusNCBI TaxonomyNCBITaxon:76025

Prunus africanaNCBI TaxonomyNCBITaxon:379279

Prunus cerasusNCBI TaxonomyNCBITaxon:140311

Prunus domesticaNCBI TaxonomyNCBITaxon:3758

Ptychopetalum olacoidesNCBI TaxonomyNCBITaxon:597401

Pueraria montanaNCBI TaxonomyNCBITaxon:132459

Punica granatumNCBI TaxonomyNCBITaxon:22663

Raphanus sativusNCBI TaxonomyNCBITaxon:3726

Reynoutria japonicaNCBI TaxonomyNCBITaxon:488216

Rheum palmatumNCBI TaxonomyNCBITaxon:137221

Rhodiola roseaNCBI TaxonomyNCBITaxon:203015

Ribes nigrumNCBI TaxonomyNCBITaxon:78511

Rosa caninaNCBI TaxonomyNCBITaxon:74635

Rubus idaeusNCBI TaxonomyNCBITaxon:32247

Rumex crispusNCBI TaxonomyNCBITaxon:174649

Ruscus aculeatusNCBI TaxonomyNCBITaxon:59067

Saccharomyces cerevisiaeNCBI TaxonomyNCBITaxon:4932

Salix albaNCBI TaxonomyNCBITaxon:75704

Salvia hispanicaNCBI TaxonomyNCBITaxon:49212

Salvia officinalisNCBI TaxonomyNCBITaxon:38868

Salvia rosmarinusNCBI TaxonomyNCBITaxon:39367

Sambucus nigraNCBI TaxonomyNCBITaxon:4202

Schisandra chinensisNCBI TaxonomyNCBITaxon:50507

Scutellaria baicalensisNCBI TaxonomyNCBITaxon:65409

Senna alexandrinaNCBI TaxonomyNCBITaxon:72402

Serenoa repensNCBI TaxonomyNCBITaxon:4722Saw palmetto, a small palm whose berries are taken as a lipid extract or as whole dried fruit. The preparation is recorded with each finding.

Sesamum indicumNCBI TaxonomyNCBITaxon:4182

Shouchella clausiiNCBI TaxonomyNCBITaxon:79880

Silybum marianumNCBI TaxonomyNCBITaxon:92921

Solanum lycopersicumNCBI TaxonomyNCBITaxon:4081

Spinacia oleraceaNCBI TaxonomyNCBITaxon:3562

Streptococcus salivariusNCBI TaxonomyNCBITaxon:1304

Streptococcus thermophilusNCBI TaxonomyNCBITaxon:1308

Syzygium aromaticumNCBI TaxonomyNCBITaxon:219868

Tanacetum partheniumNCBI TaxonomyNCBITaxon:127999

Taraxacum officinaleNCBI TaxonomyNCBITaxon:50225

Terminalia arjunaNCBI TaxonomyNCBITaxon:172200

Theobroma cacaoNCBI TaxonomyNCBITaxon:3641

Thymus vulgarisNCBI TaxonomyNCBITaxon:49992

Trametes versicolorNCBI TaxonomyNCBITaxon:5325

Tribulus terrestrisNCBI TaxonomyNCBITaxon:210369

Trifolium pratenseNCBI TaxonomyNCBITaxon:57577

Trigonella foenum-graecumNCBI TaxonomyNCBITaxon:78534

Triticum aestivumNCBI TaxonomyNCBITaxon:4565

Turnera diffusaNCBI TaxonomyNCBITaxon:329212

Ulmus rubraNCBI TaxonomyNCBITaxon:102693

Uncaria tomentosaNCBI TaxonomyNCBITaxon:128375

Urtica dioicaNCBI TaxonomyNCBITaxon:3501

Vaccinium macrocarponNCBI TaxonomyNCBITaxon:13750

Vaccinium myrtillusNCBI TaxonomyNCBITaxon:180763

Valeriana officinalisNCBI TaxonomyNCBITaxon:19953

Vitex agnus-castusNCBI TaxonomyNCBITaxon:54477

Vitis viniferaNCBI TaxonomyNCBITaxon:29760

Withania somniferaNCBI TaxonomyNCBITaxon:126910Ashwagandha, a shrub whose root is used in Ayurvedic medicine.

Yucca schidigeraNCBI TaxonomyNCBITaxon:334597

Zingiber officinaleNCBI TaxonomyNCBITaxon:94328

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