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Reference

Evidence

CompoundsSubstances with curated findings
OutcomesMeasured endpoints
ProteinsTransporters and enzymes
InteractionsPairs that share biology
PapersEvery paper a finding cites
ArticlesReadings of the evidence

Chemistry

ReactionsRhea and Human-GEM, by subsystem
ReachWhat a compound can become

Reference layer

PathwaysReactions grouped under one name
ProcessesWhat proteins are annotated as doing
AnatomyTissues, by what is expressed there
Cell typesCells, by what is expressed there
OrganismsSpecies a compound is prepared from
MaterialsSubstances that are not one molecule
AssessmentsRegulatory determinations, transcribed
DiseasesFeatures, genes, and where each sits

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Reference

Evidence

Compounds
Outcomes
Proteins
Interactions
Papers
Articles

Chemistry

Reactions
Reach

Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases

Atlas Graph Twin Access

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Catalyst

Computational infrastructure for human biology, built on a provenance-aware knowledge graph. Findings retain their sources; research and simulation are the next layers.

The graph

Compounds
Outcomes
Proteins
Atlas
Interactions
Papers
Articles
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Reference layer

Pathways
Processes
Anatomy
Cell types
Organisms
Materials
Assessments
Diseases
Reactions
Reach

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A reference for what the literature reports. Not medical advice.

© 2026 CatalystPrivacy TermsReference data under the licences listed on the attribution page.

Index

Organisms

Names from NCBI Taxonomy

organisms in the graph: 201

Filter organisms by name

#a b c d e f g h i j k l m n o p q r s t u v w x y z

21 of 201 begin with A

Achillea millefoliumNCBI TaxonomyNCBITaxon:13329
Actaea racemosaNCBI TaxonomyNCBITaxon:64040
Aesculus hippocastanumNCBI TaxonomyNCBITaxon:43364
Aframomum meleguetaNCBI TaxonomyNCBITaxon:637930
Akkermansia muciniphilaNCBI TaxonomyNCBITaxon:239935
Allium sativum

More of the reference layer

Pathways
Biological processes
Anatomy
Cell types
Materials
Regulatory assessments
Diseases

Evidence: Compounds · Outcomes · Papers · Search

NCBI TaxonomyNCBITaxon:4682

Aloe veraNCBI TaxonomyNCBITaxon:34199

Althaea officinalisNCBI TaxonomyNCBITaxon:145745

Andrographis paniculataNCBI TaxonomyNCBITaxon:175694

Anethum foeniculumNCBI TaxonomyNCBITaxon:2849586

Angelica sinensisNCBI TaxonomyNCBITaxon:165353

Annona muricataNCBI TaxonomyNCBITaxon:13337

Apium graveolensNCBI TaxonomyNCBITaxon:4045

Arctium lappaNCBI TaxonomyNCBITaxon:4217

Arctostaphylos uva-ursiNCBI TaxonomyNCBITaxon:84009

Artemisia absinthiumNCBI TaxonomyNCBITaxon:72332

Asparagus officinalisNCBI TaxonomyNCBITaxon:4686

Asparagus racemosusNCBI TaxonomyNCBITaxon:272846

Astragalus membranaceusNCBI TaxonomyNCBITaxon:649199

Avena sativaNCBI TaxonomyNCBITaxon:4498

Azadirachta indicaNCBI TaxonomyNCBITaxon:124943